Gene BURPS1106A_A0800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A0800 
Symbol 
ID4905979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp798784 
End bp800724 
Gene Length1941 bp 
Protein Length646 aa 
Translation table11 
GC content72% 
IMG OID640143906 
Productsigma-54 dependent trancsriptional regulator 
Protein accessionYP_001074836 
Protein GI126457531 
COG category[K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3284] Transcriptional activator of acetoin/glycerol metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.236546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCAAT CTTCCGTGCT GCCCGCCGCG GCGAGCCGCG TCGATCTGCT CGCGCAAGCG 
CACGCCCGCT CGCTGTCGGT CGGCCTGCGC GCGTCCGAGC TGCCCGATTT CTCGCCGCTG
TCGCGCGCCG CGCTGCGCGA GCTGATCGAC GGCAGCCAAT CGCTGTACAC GCACGCGCGC
CCGGTGATGG ACACGCTGCA CACGCAGATC GCCGATACGC AAAGCCTCGT GCTGCTGACC
GACCGCGACG GCGTGATCCT GCACAGCATC GGCGACGCCG ATTTCGTCGA AAAGGCGAAC
CGGGTCGCGC TCTGCCCCGG CGTGTCATGG GCGGAAGACG CGCGGGGCAC GAATGCGATC
GGCACCGCGC TGATCGCGGG CCAGGCGCTC GCCGTGCACG GCGCCGAGCA TTTCCTGCGC
GCGAATCACG TGCTCACCTG CTCGTGCGCG CCGATCGTCG ATCCGTTCGG CCGCCTCCTC
GGCGCGCTCG ACGTGAGCGG CGATCCGCGC GGCTTCAGCC CGCATACGCT CGCGCTCGTG
AAGATGTCCG CGCAACTGAT CGAAAACCAT CTGTTCGCGA ATCAGTGCGC GGACGCGCTG
CGCGTGCGCT TTCACGCGCA CGACGAATTC GTCGATTCGC TGTTCGCCGG CCTCGTCGCG
TTCAGCCCGA GCGGTGCGCT GATCGCGGCC AATCGCAGCG CACAATTCCA GCTCGGCGCG
AATCTCGATG CACTGCAACA GCGCGGTTGC GACGAACTGT TCGGCCTGTC TTTCGCGAAG
CTCGCGCAGC ATGCGGCGCG CGAACCGCTC GCGTGCTTCA CGCTGACGCT CGGCACCGGC
GTGCGCGTGC GCGCGCGCTG CGAATTCGCG CACGCGCAGC GCACGGCCGT TGCGGTGAGC
GGGCGCGCCG CGCCGCCGCG CGCAACCGAT GCGGCGCGCG ACGAGGAGCC CGACGCGATC
ACGTTCGCGA CGCTCGATAC GGGCGATGCG CGCATGACCG CCGTGCTGCA GCGGGTCGGC
AAGGTGCGCG GGCGCGACCT GCCGGTGCTC GTGCTCGGCG AAACCGGCAC CGGCAAGGAA
TGGCTCGCGC GCGCGCTGCA CCACGCGTCG CCGCGCCGCG ACGGCCCGTT CGTCGCGGTC
AACTGCGCGG CGCTGCCCGA TTCGCTGATC GAAGCGGAAC TATTCGGCTA CGAGGACGGC
GCGTTCACCG GCGCGCGCAA GCGCGGCAGC CCCGGCAAGA TCGCGCAGGC GGACGGCGGC
ACGCTGTTTC TCGACGAAAT CGGCGACATG CCGCTCGCGC AGCAGGTCCG GCTGATGCGC
GTGCTGCAGG AGCGCGCGGT GATGCCGCTC GGCGGCGCGC GCGCGGTGCC GGTGGACGTG
CGGATCGTCT GCGCGACGCA CCGCGACCTG CGCGCGATGA TCGCCGCCGG CACGTTTCGC
GAGGATCTGT TCTACCGGAT CAACGGCCTG GCGGTCACGC TGCCGCCGCT TGCCGAGCGC
TCGGATCTCG AGACGCTCGT CGCCCGCGTG CTCGCGCGGC TCGCGCGCAG CGAGCCGATG
CCGGCCACCG TGTCGGCGGC GGTGCTCGCC GCGTTCGCGC GCTGCCGGTG GCCGGGCAAT
CTGCGTCAAA TGACGAACGT GCTGCGCACG GCGGGCATGC TCGCCGAAGG CGAAGCGCGG
ATCGACGTCG AGCATCTGCC TGACGATTTC TGGCTCGACT GCGACGCGCG CGCGCGCGAT
GCGGCACCGC CGCGCACGTG TGCCGACGCG GCGGCGGGCG CGGCAGCGGC CGGCGCCTCG
ACGCTGCAGG ATCATCAGGT CGCGCTGATC GACGGCGCGC TCGACCGGCA TCGCGGCAAC
GTATCGGCGG CCGCGCGCGA GCTCGGGCTC GCGCGCAATA CCGTCTATCG GCATTTGCGT
AGACGGCGGT CGGGGGAGTG A
 
Protein sequence
MPQSSVLPAA ASRVDLLAQA HARSLSVGLR ASELPDFSPL SRAALRELID GSQSLYTHAR 
PVMDTLHTQI ADTQSLVLLT DRDGVILHSI GDADFVEKAN RVALCPGVSW AEDARGTNAI
GTALIAGQAL AVHGAEHFLR ANHVLTCSCA PIVDPFGRLL GALDVSGDPR GFSPHTLALV
KMSAQLIENH LFANQCADAL RVRFHAHDEF VDSLFAGLVA FSPSGALIAA NRSAQFQLGA
NLDALQQRGC DELFGLSFAK LAQHAAREPL ACFTLTLGTG VRVRARCEFA HAQRTAVAVS
GRAAPPRATD AARDEEPDAI TFATLDTGDA RMTAVLQRVG KVRGRDLPVL VLGETGTGKE
WLARALHHAS PRRDGPFVAV NCAALPDSLI EAELFGYEDG AFTGARKRGS PGKIAQADGG
TLFLDEIGDM PLAQQVRLMR VLQERAVMPL GGARAVPVDV RIVCATHRDL RAMIAAGTFR
EDLFYRINGL AVTLPPLAER SDLETLVARV LARLARSEPM PATVSAAVLA AFARCRWPGN
LRQMTNVLRT AGMLAEGEAR IDVEHLPDDF WLDCDARARD AAPPRTCADA AAGAAAAGAS
TLQDHQVALI DGALDRHRGN VSAAARELGL ARNTVYRHLR RRRSGE