| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0569 |
|---|
| Symbol | rfbG |
|---|
| ID | 4905328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 561478 |
|---|
| End bp | 562563 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640143675 |
|---|
| Product | CDP-glucose 4,6-dehydratase |
|---|
| Protein accession | YP_001074605 |
|---|
| Protein GI | 126456612 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.76383 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTGA CGATGCATGC GCCCGACGCT CGATTCTGGC AGGCGAGACG CGTGCTCGTG
ACGGGCCACA CGGGCTTCAA GGGAAGCTGG CTGAGCCTGT GGTTGCAGTC GCTCGGCGCG
CAGGTTCACG GGCTCGCGCT CGAGCCGCCG TCGCGCCCGT CGCTGTTCGA AACGGCGCGC
GTCGCCCAGC GCATGTCCAG CACGATCGGC GACATACGCG ACTACGACGT CGTTCGGCGA
ACGATCGCCG ATTGCAGGCC GGAGGTGGTG ATCCATCTGG CCGCCCAGCC GCTCGTGCGC
GCGTCCTATG CGGATCCGCT GTCGACCTAC GGCACCAACG TGATGGGCAC GGCCAATCTG
CTGGAGGCGC TGCGCCGCGC CGGCTGCGCG CGGGCGGTCG TCAACGTCAC CACCGACAAG
TGCTACGAGA ACCGGGATTG GCTCTGGGGC TATCGCGAGA ACGACGCGCT CGGCGGCCAC
GATCCGTACA GCAGCAGCAA GGCGTGCTCG GAGCTCGTGA GCAGTGCGTA CCGGCGCTCG
TTTTTCGCGC AGGGCGCGAC GGCGCTTGCC AGCGCGCGGG CCGGCAACGT CATCGGCGGC
GGCGACTGGG CCGCGGAGCG GCTCGTGCCC GACGTGCTGG CCGCTTTCGC GAGCGGCCGG
CCGGCGGTCA TTCGCCATCC GCATGCGGTC CGGCCGTGGC AGCACGTGCT GGATTCGCTG
TCGGGCTACC TGCGCCTCGC CGAGCGTCTG CATGCCGATG GGCAGGCATG GGCCGAAGCA
TGGAATTTCG GCCCCGACGA TGCGCAGGCC CGTACGGTCG AATGGGTGGT GTCGCGAATG
GCCCGCATCT GGGGCGGCGA TGCGCGATGG CATCCCGATT CGGCCGATCA TCCTCACGAG
GCCGCGCAAT TGAAGCTCGA CAGCTCGAAA GCGAAGGCGA GGCTCGGCTG GCGGCCGCGC
TGGAGCCTTG CGCGCGCGCT CGAATGCACG ATCGCGTGGC ACCGCGCATG GCTCGCCCGC
GAGGACATGC GCGCCGTATG CATCGAACAG ATCGCGGAAT TCGACACTTC GCCCGACCCG
ACCTAG
|
|---|
| Protein sequence | MELTMHAPDA RFWQARRVLV TGHTGFKGSW LSLWLQSLGA QVHGLALEPP SRPSLFETAR
VAQRMSSTIG DIRDYDVVRR TIADCRPEVV IHLAAQPLVR ASYADPLSTY GTNVMGTANL
LEALRRAGCA RAVVNVTTDK CYENRDWLWG YRENDALGGH DPYSSSKACS ELVSSAYRRS
FFAQGATALA SARAGNVIGG GDWAAERLVP DVLAAFASGR PAVIRHPHAV RPWQHVLDSL
SGYLRLAERL HADGQAWAEA WNFGPDDAQA RTVEWVVSRM ARIWGGDARW HPDSADHPHE
AAQLKLDSSK AKARLGWRPR WSLARALECT IAWHRAWLAR EDMRAVCIEQ IAEFDTSPDP
T
|
|---|
| |