Gene BURPS1106A_A0506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A0506 
SymboltyrB-2 
ID4903846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp495253 
End bp496452 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content67% 
IMG OID640143612 
Productaromatic amino acid aminotransferase 
Protein accessionYP_001074543 
Protein GI126456462 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1448] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTCT TCTCCGCTGT CGAACTTGCC CCCCGCGACC CTATCCTGGG CCTGAACGAA 
GCCTTCAACG CCGACACGCG CCCGACCAAG GTGAACCTGG GCGTCGGCGT CTACACCAAC
GAGGACGGCA AGATTCCGCT GCTGCGCGCC GTGCGCGACG CGGAAAAGGC ACGGGTCGAA
GCCGGCCTGC CGCGCGGCTA CCTGCCGATC GACGGGATCG CCGCCTATGA CGCATCGGTG
CAGAAGCTGC TGCTCGGCGA CGATTCGCCG CTGATCGCGG CGGGCCGCGT CGTGACGGCG
CAGGCGCTCG GCGGCACGGG CGCGCTGAAG ATCGGCGCGG ATTTCCTGCG CACCCTGAAC
CCGAAGGCGA AGGTGGCGAT CAGCGATCCG AGCTGGGAAA ACCACCGTGC CCTGTTCGAC
ATGGCGGGCT TCGAAGTCGT CGCGTACCCG TACTACGACG CGAAGACGAA CGGCGTGAAC
TTCGACGGCA TGCTGGCCGC GCTCAACGGC TACGAGCCGG GCACGATCGT CGTGCTGCAC
GCGTGCTGCC ACAACCCGAC GGGCGTGGAC CTGAACGATG CGCAATGGGC GCAGGTGGTC
GAGGTCGTGA AGGCGCGTCG GCTCGTGCCG TTCCTGGACA TCGCCTATCA AGGCTTCGGC
GAAAGCATCG AGGCCGACGC GGCCGCGGTG CGCCTGTTCG CGGCGGCCAA TCTGAACGTG
TTCGTATCGT CGTCGTTCTC GAAGTCGTTC TCGCTGTATG GCGAGCGCGT CGGCGCGCTG
TCGATCATCA CCGACAGCAA GGACGAAGCT GCACGCGTGC TGTCGCAACT GAAGCGCGTG
ATTCGCACGA ACTATTCGAA CCCGCCGACG CACGGCGGCG CGATCGTTGC CGCGGTGCTC
GCCTCGCCGG AACTGCGCGC TTCGTGGGTG CAGGAACTGG GCGAGATGCG CGATCGCATC
CGCGCGATGC GCAACGGCCT CGTCGAGCGC CTGAAGGCGG CCGGCATCGA GCGCGACTTC
AGCTTCATCA ACGCGCAACG CGGGATGTTC TCGTACTCGG GCCTGACGTC CGCGCAAGTC
GACCGTCTGC GCGAAGAATT CGGCATCTAT GCGGTCAGCA CCGGCCGGAT CTGCGTCGCG
GCGCTCAACA CGCGCAACCT CGACGTCGTC GCGAACGCGA TCGCCGCGGT GTTGAAGTAA
 
Protein sequence
MSLFSAVELA PRDPILGLNE AFNADTRPTK VNLGVGVYTN EDGKIPLLRA VRDAEKARVE 
AGLPRGYLPI DGIAAYDASV QKLLLGDDSP LIAAGRVVTA QALGGTGALK IGADFLRTLN
PKAKVAISDP SWENHRALFD MAGFEVVAYP YYDAKTNGVN FDGMLAALNG YEPGTIVVLH
ACCHNPTGVD LNDAQWAQVV EVVKARRLVP FLDIAYQGFG ESIEADAAAV RLFAAANLNV
FVSSSFSKSF SLYGERVGAL SIITDSKDEA ARVLSQLKRV IRTNYSNPPT HGGAIVAAVL
ASPELRASWV QELGEMRDRI RAMRNGLVER LKAAGIERDF SFINAQRGMF SYSGLTSAQV
DRLREEFGIY AVSTGRICVA ALNTRNLDVV ANAIAAVLK