| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0481 |
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| Symbol | hppD |
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| ID | 4905254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 470449 |
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| End bp | 472503 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640143587 |
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| Product | AP endonuclease |
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| Protein accession | YP_001074523 |
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| Protein GI | 126457644 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases
[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCGTT CGATCGCCAC CGTCTCGCTA TCGGGCACGC TCGTCGAGAA GCTCCGCGCG
ATTCGCGCCG CCGGCTTCGA CGGCGTCGAG ATCTTCGAGA ACGACTTGCT CTACTTCGAC
GGCTCGCCCG CCGACGTGCG CGCCATCGCC GCCGATCTCG GCCTCGCCAT CGTGCTGTTC
CAGCCGTTTC GCGATTTCGA GGGCGTGCCG CCCGAGCGCC TCGCGCGCAA TCTCGAGCGC
GCGAAGCGCA AGTTCGAGCT GATGCACGCG CTCGGCGCGA ACCGCATGCT CGTGTGCAGC
AACATGTCGC CGGACGCGAT CGGCGACGAC GCACTGCTCA TCGACCAGTT GGGCGCGCTC
GCGCGCGCCG CGCAGGCGGC GGGCGTCGTC GCCGCGTACG AGGCGCTGGC ATGGGGTCGG
AACGTGAAGA CTTATGGCCA TGCGTGGCGG CTCGTCGACG CGGTGAACCA TCCGAGCCTC
GGGCTTGCGC TCGACAGCTT CCATACGCTG TCGCTCGGCG ATTCGCCGGA CGGCATCGCG
CGCATTCCCG GCGAGCGGAT CGCGTTCGTG CAGATCGCCG ACGCGCCGAA GCTCGCGATG
GACGTGCTCG AATGGAGCCG GCATTACCGG TCGTTTCCGG GCCAGGGCGA TTTCGACCTC
GCGGGATTCA CCGCGCGCGT GATCGAATCG GGCTACGCCG GGCCGCTGTC GCTCGAGATC
TTCAACGACG GCTTTCGCGC CGCGCCGACC GCGCTGACGG CCGCGGACGG CTACCGGTCG
CTGCTGTATC TCGAGGAGAC CACGCGCGAG CGGCTCGCGT GCGACGCGCG GCGCGCACGT
CGGGCGGGCG GCGCGCCGGG AGCGGGCGAA ACGCGCGGCG AGCGCGAAAG ACACGACGCG
CACGGCGAAC GTGGCGAACA CCGCGCGCAC GATAAAGACG ACAAGCCAGA CGACAAGCGC
GGCGGCCCCG ACGAACGCGA AAGCCGCGCG GCGCACCCGC GCCCCGCGCA GCCGCTCTTC
GCGCCGCCGC CCGCGCCCGC GCACGTCGGC TTTCAGTTCA TCGAATTCGC GGTCGACGCG
GCCGCCGCCG AGAACGTCGC CGGCTGGCTC GGCAAGCTGC GCTTTCGGCG CGCGGGCCGT
CACCGCTCGA AGGACGTGAC GCTGTATCAG CACGGCGCGG CGTCGATCGT GTTGAACGCC
GAGCGCGATT CGTTCGCCGA CGCGTTCTTT CAGGAGCACG GCCTATCGCT GTGCGCGTCG
GCGTTTCGCG TCGACGATGC GCGTCTCGCG TTCGAGCGCG CGGCGGGCTA CGGCTACGCG
CCGTTCTCGG GCCGCGTCGG CCCGAACGAG CGCGTGCTGC CGAGCGTGCG CGCGCCCGAC
GGCAGCCTGA ACTACTTCGT CGACGAGGCG CCCGGCGCGC CGACGCTGTA CGAATCGGAT
TTCGTGCTGA CCGACATCGA CGGGCCAAGC GAAGTCGGCC CGCTCGCCGG CATCGATCAC
GTGTGCCTCG CGCTGCCCGC CGACGCGCTC GATACGTGGG TGCTGTTCTT CAAGACCGCG
TTCGGCTTCG AGGCCGAGCG CAACTGGCTC GTGCCGGACC CGTACGGGCT CGTGCGCAGC
CGCGCGGTGC GCAGCCCGGA CGGCTCGGTG CGCATCGCGC TCAATGCGTC GGTGGACCGG
CATACGGCCG TCGTCCGGTC GCTCGAGCGC TATCGCGGCA CGGGGCTCAA TCATGTCGCG
TTCCGCGCGG ACGACATCGT CGCGGCGATC GCCGAATTCG CCGCCGACGG CGTGCCGTTC
CTGCGGATTC CGCGCAATTA CTACGACGAT CTCGCCGCAC GCTACGCGCT GCCCGACGAG
ACGATCGACA CGCTGCGCCG CCATCACCTG CTGTACGACC GCGACGACGC GGGCGGCGAA
TTCCTGCATG CGTACACCGA GCTCGTCGAC GGCCGCTTCT CGTTCGAGAT CGTCGAGCGG
CGCGGCGGCT ACGACGGATA CGGCGCGGCG AACGCGGCCG TGCGGCTCGC CGCGCAGGCG
CAGCGCAGGG GGTAA
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| Protein sequence | MQRSIATVSL SGTLVEKLRA IRAAGFDGVE IFENDLLYFD GSPADVRAIA ADLGLAIVLF
QPFRDFEGVP PERLARNLER AKRKFELMHA LGANRMLVCS NMSPDAIGDD ALLIDQLGAL
ARAAQAAGVV AAYEALAWGR NVKTYGHAWR LVDAVNHPSL GLALDSFHTL SLGDSPDGIA
RIPGERIAFV QIADAPKLAM DVLEWSRHYR SFPGQGDFDL AGFTARVIES GYAGPLSLEI
FNDGFRAAPT ALTAADGYRS LLYLEETTRE RLACDARRAR RAGGAPGAGE TRGERERHDA
HGERGEHRAH DKDDKPDDKR GGPDERESRA AHPRPAQPLF APPPAPAHVG FQFIEFAVDA
AAAENVAGWL GKLRFRRAGR HRSKDVTLYQ HGAASIVLNA ERDSFADAFF QEHGLSLCAS
AFRVDDARLA FERAAGYGYA PFSGRVGPNE RVLPSVRAPD GSLNYFVDEA PGAPTLYESD
FVLTDIDGPS EVGPLAGIDH VCLALPADAL DTWVLFFKTA FGFEAERNWL VPDPYGLVRS
RAVRSPDGSV RIALNASVDR HTAVVRSLER YRGTGLNHVA FRADDIVAAI AEFAADGVPF
LRIPRNYYDD LAARYALPDE TIDTLRRHHL LYDRDDAGGE FLHAYTELVD GRFSFEIVER
RGGYDGYGAA NAAVRLAAQA QRRG
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