| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0428 |
|---|
| Symbol | fabD |
|---|
| ID | 4905686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | - |
|---|
| Start bp | 403731 |
|---|
| End bp | 404630 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640143535 |
|---|
| Product | malonyl CoA-acyl carrier protein transacylase |
|---|
| Protein accession | YP_001074471 |
|---|
| Protein GI | 126456819 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
|---|
| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCAC TGATTTTCCC GGGGCAGGGC GCGCAGGCGG CCGGCATGGG CGCCGGTCTC
TTCGAGCGGT TTCCGGAGAT CGTCGCGACG GCTAACGACG TGATGGGCCT GTCGATCGAA
CGGCTTTGCC TCGACGATCC GCACGGCCAG CTCGCCGACA CCCGCTACGC TCAGCCCGCG
ATCTTCGTCG TCAACGCGCT CCACCTCGCC GCATGGCGCG ACGCGCACGA CACGGGCGAC
GGCGCGCCCG TGTGGCTCGC CGGACACAGC CTCGGCGAAT ACAGCGCGCT CCTCGCCGCC
GGCGTGTTCG ACTTTCGCAC CGGGCTCGAG ATCGTCAAGC GGCGCGGCGA GCTGTTCGCA
TCGGCGGGCG GCGGCGCGAT GGCGGCCGTC GTCGGCGTGA CCGCCGCCGA GCTCGGCCGC
CGGCTGCGCG CCGCCGGCTT CGACGACATC GATCTCGCGA ACCTCAACAG CGCCGAGCAG
ACGGTGATCG CCGGCCCGGC CGCATCGGTC GACGCCGCCG CGAGCATGCT CGACGCGGGC
GGCGACGTCA CCGTTCATCC GCTGAAGGTG AGCGGCGCCT TTCACTCGCG CCGCATGACG
CCGCTCAAGC CCGCGTTCGA GGCGTTCGTC TCGCGCTTCG CGCTCGCCGA GCCCGCGCGG
CCCGTCGTGT CGAACGTGAC CGCCCGCCCG TATCAGCCGC CGGGCACGCC CGCCGACTAT
CTCGTCGAGC AGCTCGATCA GCCGGTGCGC TGGCGCGACA GCGTCCGCCA CATGCTGCGC
GCGGGCGTCG ACGAGTGGAT CGAGCTCGGC CCCGGCCGCC GGATCCTCAC GCGCCTCGTC
GACGCGATCC GGCTCGAACC GCCCGAGCGG CACGCCGCGC CGCAACCCGC ACTCCCTTGA
|
|---|
| Protein sequence | MKALIFPGQG AQAAGMGAGL FERFPEIVAT ANDVMGLSIE RLCLDDPHGQ LADTRYAQPA
IFVVNALHLA AWRDAHDTGD GAPVWLAGHS LGEYSALLAA GVFDFRTGLE IVKRRGELFA
SAGGGAMAAV VGVTAAELGR RLRAAGFDDI DLANLNSAEQ TVIAGPAASV DAAASMLDAG
GDVTVHPLKV SGAFHSRRMT PLKPAFEAFV SRFALAEPAR PVVSNVTARP YQPPGTPADY
LVEQLDQPVR WRDSVRHMLR AGVDEWIELG PGRRILTRLV DAIRLEPPER HAAPQPALP
|
|---|
| |