| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0396 |
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| Symbol | gabT |
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| ID | 4903566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 375589 |
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| End bp | 376872 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640143503 |
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| Product | 4-aminobutyrate transaminase |
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| Protein accession | YP_001074439 |
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| Protein GI | 126455614 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.925328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACAATG CCGATCTGCA CGCCCGCAAG AACGCCGCGA CGCCGCGTGG CGTCGGCGTG
ATGTGCGATT TCTACGCGGC ACGCGCCGAG AACGCCGAGC TGTGGGATGT CGAGGGCCGC
CGCTTCATCG ATTTCGCGGC CGGCATCGCG GTCCTGAACA CGGGCCATCG CCATCCGAGG
ATCGTGAAGG CGATCGCCGA CCAGCTCGGG CAATTCACGC ATACCGCGTA TCAGATCGTG
CCGTACGCGT CGTACGTCGA GCTCGCCGAG AAGATCAACG CGCGCGCGCC GATCGCGCAG
CCGAAGAAGA CCGCGTTCTT CACGACGGGC GCGGAAGCGG TCGAGAACGC GGTGAAGATC
GCGCGCGCCT ACACCGGCCG GCCGGGCATG ATCGCGTTCG CGGGCGGCTT CCACGGCCGC
ACGATGATGG GCATGGCGCT CACCGGCAAG GTCGCGCCGT ACAAGATCGG CTTCGGCCCG
TTCCCGGGCG ACGTGTTCCA CGCGCCGTAC CCGAACGCGT TGCACGGCGT GACGAGCGCC
GATTCGATCG CGGCCGTCGA AACGCTGTTC AAGGCCGACA TCGATCCGAA GCGCGTCGCC
GCGATCATCT TCGAGCCGGT GCAGGGCGAA GGCGGCTTCA ACCCGGCGCC CGCCGAGTTC
GTGCGCGCGC TGCGCAAGCT GTGCGACGCG CACGGCATTC TCCTCATCGC CGACGAAGTG
CAGACGGGCT TCGCGCGCAC GGGCAAGCTG TTCGCGATGG AGCACTACGA CGTCTCGGCC
GACCTGATGA CGATCGCGAA GAGCCTCGCG GGCGGGATGC CGCTGTCGGG CGTCGTCGGC
CGCGCGGACG TGATGGACGC GGCCGCGCCG GGCGGCCTGG GCGGCACGTA CGCGGGCAAT
CCGCTCGCCG TGGCCGCCGC GCACGCGGTG CTCGACGTGA TCGACGAGGA GAAGCTCGCC
GAGCGCGCGA CCGTGCTCGG CGACAAGCTG AAGGCGAAGC TCGCCGCGCT GCGCGCCGAG
CTGCCGCAGA TCGTCGACGT GCGCGGCCCG GGCGCGATGG TCGCCGCGGA ATTCGTCGAT
CCGCACACGC GCGCGTCCGA TGCCGCGTTC ACGAAGCGCG TGCAGACGCT CGCGCTCGAG
CGCGGGCTGC TGCTGCTCAT CTGCGGCGTC GACGCGAACG TGATACGTTT CCTGTTTCCT
CTCACCATCG AGGATGCCGT GTTCGACGAA GCGCTCGGCA TTCTCGAGAG CGTGCTGAGG
GAAGCGGTGG GCGTGCCCGC CTGA
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| Protein sequence | MNNADLHARK NAATPRGVGV MCDFYAARAE NAELWDVEGR RFIDFAAGIA VLNTGHRHPR
IVKAIADQLG QFTHTAYQIV PYASYVELAE KINARAPIAQ PKKTAFFTTG AEAVENAVKI
ARAYTGRPGM IAFAGGFHGR TMMGMALTGK VAPYKIGFGP FPGDVFHAPY PNALHGVTSA
DSIAAVETLF KADIDPKRVA AIIFEPVQGE GGFNPAPAEF VRALRKLCDA HGILLIADEV
QTGFARTGKL FAMEHYDVSA DLMTIAKSLA GGMPLSGVVG RADVMDAAAP GGLGGTYAGN
PLAVAAAHAV LDVIDEEKLA ERATVLGDKL KAKLAALRAE LPQIVDVRGP GAMVAAEFVD
PHTRASDAAF TKRVQTLALE RGLLLLICGV DANVIRFLFP LTIEDAVFDE ALGILESVLR
EAVGVPA
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