Gene BURPS1106A_A0359 details

Gene Information

• Locus tag: BURPS1106A_A0359
• Symbol: rpiB
• ID: 4904034
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: -
• Start bp: 341351
• End bp: 341845
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640143466
• Product: ribose 5-phosphate isomerase B
• Protein accession: YP_001074402
• Protein GI: 126458171
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0698] Ribose 5-phosphate isomerase RpiB
• TIGRFAM ID: [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family; [TIGR01120] ribose 5-phosphate isomerase B; [TIGR02133] ribose 5-phosphate isomerase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.167619
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTGG CGATCGGCTG CGACGAAGCG GCCTACGCGC TCAAGGAGTC GATCAAGCGG 
CACCTGCGCG CGACGCACCC CGAGCTCGAG CTGGTCGACT TCGGCACGCA CAGCGCGGAC 
GAGGCGGTGC TGTACCCCGA TATCGCGATC GAAGTCGCGC AGCGCGTCGC GGCCGGCGAA 
TTTCCGCGCG CGATCCTGCT GTGCGGCACG GGCATCGGCG TGGCGATCTC CGCGAACAAG 
GTGCCGGGCA TCCGCGCCGC CCAGTGCCAT GACACCTACT CGGCCGAGCG CGCGCGGCGC 
AGCAACGACG CGCAGATCGT CACGATGGGC GCGCGCGTGA TCGGCACCGA GCTCGCGAAC 
AGCATCGTCG ACGCATGGCT TAGGGCAGAA TTCGACGGCG GCCGCTCGCA GCCGAAGGTG 
CAGCGGATCG CCGACTACGA ACGCCGGGCG GGCCTCACCC AGGCCGGCCC GAATGACGCG 
CACCGCGGTT CATGA 

 

Protein sequence

MKVAIGCDEA AYALKESIKR HLRATHPELE LVDFGTHSAD EAVLYPDIAI EVAQRVAAGE 
FPRAILLCGT GIGVAISANK VPGIRAAQCH DTYSAERARR SNDAQIVTMG ARVIGTELAN 
SIVDAWLRAE FDGGRSQPKV QRIADYERRA GLTQAGPNDA HRGS