Gene BURPS1106A_A0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A0238 
Symbol 
ID4904504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp226627 
End bp227973 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content69% 
IMG OID640143345 
Producthypothetical protein 
Protein accessionYP_001074281 
Protein GI126457249 
COG category[S] Function unknown 
COG ID[COG3522] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03353] type VI secretion protein, VC_A0114 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTGGC ATAACAAGGT CGTCTGGAGC GAGGGGCTTT TCATGCGCCC GCAGCTGTTC 
CAGCAGCAGG AGCGCTATCT CGAGCACTAC GCGCACAAGC GCGCGGCGCC GCTGTCGCCG
TTCTTCTTCG GCTTCAGCCA CTTCAGCCTC GACAGCGAGG CGCCGGCGCT CGGCAAGATC
ATCGTGAAAT CGGCGAGCGG CGTGTTCGCC GACGGCACGC CGTTCGACGC GCCGGGCAGC
ACGCCGCCGC CCGCGCCGCT CACGATCCGG CCCGAGCATC TGGACCAGGT GATCTACCTC
GCGGTGCCGA TCCGCGTGCC GAACGGCGAG GAAACCGCAT TCGACCGCGC GGCCGAATCG
CTCGCGCGCT ATGCCGTGTT CGAAACCGAC CTGCGCGACA CGAACTCGAT CGGGCAAGGG
CCGAAGACGG TCCAGTTGTC GAACCTGCGC CTGCGGCTGC TTCCGGAAAA GGAACTGACG
GACGCGTGGA TCGGGCTCGC GCTCACGCGC GTGAAGACGA TTCGCGCGGA CGCGAGCATC
GAGCTCGACG ACATGCTGAT TCCGCCCGTG GTCGGCTACG GCGCGAGCGA CACGCTCGCG
AGCTGGCTCG CGAAGATCCA CGATCTCACG CGCCTGCGCG CGAACGCGCT CGCCGAGCGC
CTGACGGGCT CGGACGGCCG GGCGGGCACG ACGGCCGAAG TATCCGACTA CCTGCTGCTG
CAAACGCTCA ATCGCTACGA GCCGCTGCTG AAACACCTGC AGCGCGTGCC CACGACGTCG
CCCGCCGAGC TGTACGCGCT GCTCATCGGC ATGGCGGGCG AGCTGTCCAC CTACGTGCGC
ACCGATACGC GCCGGCCGCT CGATACGCAC CCGCCCTATC AGCACGTCGC GCCGCATCTG
TGCCTGAAGC CCGTCGTCGA CGACACGCAC CGGCTGCTCA ACGCCGTGCT CGTGCGCAGC
GCGCAGCGCC TCGCGCTCGC CGATCTGGGG CACGGAATGC TCAACGCGGT CGTCGATCCG
GTCGACATGC AGGGCTTCAC CGCGGTCGTG CTCGCGGTGC ATGCGCAGAT GCCGCCCGAT
CTGCTGCAGC AGCAGTTCGC CGCGCAGGCG AAGGCGGGGC CGTCCGAGCG GCTGCCGGAC
CTCGTGCGCA GCCATCTGTC CGGCATCGCG CTGCAGACGC TGCCGGTGCC GCCCCGGCAG
ATCCCGTTCA ACGCCGGCTA CGTCTATTAC GAGCTCGCGC GCGGCGGGCC GCTGTGGGAC
GAAGTCGCGC AGCACGGCGG GCTCGCGCTG CACATCGCCG GCGAATTTCC GTCGCTGAAG
CTCGAGCTAT GGGGCATTCG CGGATAG
 
Protein sequence
MSWHNKVVWS EGLFMRPQLF QQQERYLEHY AHKRAAPLSP FFFGFSHFSL DSEAPALGKI 
IVKSASGVFA DGTPFDAPGS TPPPAPLTIR PEHLDQVIYL AVPIRVPNGE ETAFDRAAES
LARYAVFETD LRDTNSIGQG PKTVQLSNLR LRLLPEKELT DAWIGLALTR VKTIRADASI
ELDDMLIPPV VGYGASDTLA SWLAKIHDLT RLRANALAER LTGSDGRAGT TAEVSDYLLL
QTLNRYEPLL KHLQRVPTTS PAELYALLIG MAGELSTYVR TDTRRPLDTH PPYQHVAPHL
CLKPVVDDTH RLLNAVLVRS AQRLALADLG HGMLNAVVDP VDMQGFTAVV LAVHAQMPPD
LLQQQFAAQA KAGPSERLPD LVRSHLSGIA LQTLPVPPRQ IPFNAGYVYY ELARGGPLWD
EVAQHGGLAL HIAGEFPSLK LELWGIRG