| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0156 |
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| Symbol | clpB |
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| ID | 4904952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 144237 |
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| End bp | 146924 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640143263 |
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| Product | chaperone clpB |
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| Protein accession | YP_001074199 |
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| Protein GI | 126457862 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.102124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTGTGCAA ACGTCGCATA TTCACGAATT CACGATCGAG ACATGACAGT TTCAAGACAG
GCACTATTCG GCAAGCTCGG CTACTCGCTG TTTCGCAGCA TCGAATCGGC GACGGCGTTC
TGCAAGCTTC GCGGCAACCC TTACGTCGAG CTGGTGCATT GGCTGCATCA GATGCTTCAG
GCCGCTGACG GCGATATGCA GCGGATCGCT CGCCACTGCG ACATCGACCT CGGCGAGCTG
GAGCGCGACA TGGTGCGCGC GCTCGGCGAA CTGCCGGCGG GCGCGAGCTC GATCAGCGAT
TTCTCGCACC ACATCGAGAC GGCGATCGAG CGCGCGTGGG TGCTGGCGAC ACTGGACTTC
GGCGATCGCC GGATTCGCGG CGCGTGGCTA CTGGCTGCGT TGCTGAAGAC GCCGGAGCTC
AGGCGCGTAC TGCTGTCGAT TTCGTCCGCG TTCGGCCGGA TTCGTGTCGA CGAACTGGAT
GCGATGTTGC CGGCCTGGAT CGACGGCTCG CCCGAGGCGA ACGAGACGCC GTACGACAAC
AGCGACTTCG GCGCGGCCAT ACCGGGCGAG GCGTCGAGCG CGATGCAGCA AAAGGGCGGC
GGTTCACCGC TGGAGCAGTT CTGCCTCGAC CTCACCGCGC GAGCGCGAGC GGGGCAGATC
GATCCGGTCG TCGGTCGTGA GCTGGAAATC CGCACGATGA TCGACGTCCT GTTGCGCCGC
CGCCAGAACA ACCCGCTGCT GACGGGCGAG GCGGGTGTGG GCAAGACGGC CGTCGTCGAA
GGGCTCGCGC GCGCGATCGC CGCCGGCGAT GTGCCGCCGA AGCTTGCCGA TGCGCGCCTG
CTGAGCCTCG ATGTCGGCGC GCTGTTGGCC GGGGCGAGCA TGAAGGGCGA ATTCGAGGCG
CGCCTGAAAG GCGTGCTGGA GGCGGCGGCG AAAGCGACGC TGCCCGTCAT TCTGTTTGTC
GACGAGATTC ACACGCTGAT CGGCGCGGGC GGCCAGGCGG GCACCGGAGA TGCCGCGAAC
CTGCTCAAGC CCGCGCTCGC GCGCGGCACG CTGCGAACGA TCGGTGCGAC GACGTGGGCG
GAATACAAGC GGCACATCGA AAAGGATCCG GCGCTCACAC GCCGCTTCCA GGTGTTGCAG
GTTCCCGAGC CCGACGAGGC GGCCGCGATC GACATGGTTC GAGGGCTGAC GCGAACCTTC
TCGCGTCATC ATGGCGTCGT CGTGCTGGAC GAGGCGATTC GCGCGGCGGT CAAGCTGTCG
CATCGCTACA TTCCATCCCG TCAGTTGCCG GACAAGGCGA TCAGCCTGCT CGATACGGCG
TGCGCGCGCG TCGCGTTGTC GCAGCATGCG CCGCCGCGTG AGCTGCAGGA CGTCCGCAGA
AGATTGGAGG CCGCGAGGGT GCGGCTCGAA TTGCTCGACG GCGAGCAGCG CATCGGCCTT
GGCGACGAAG CCGCGCTCGC GCAGTCTCGC GCGGAAATCG CCGCGCTCGA GGTGGAGGAG
CAATCGATCG ACGCTTGCTG GCGGCAGCAG ATCGAGGCCG CGCAGACGCT GCTCAGCGCG
CGCGAGGCGG CGGGCGACGC TGCGGCGAGC GCGATCGACG CGCTGCGCGA GCTGGAGCAT
GCGCTGTCGA ACCTGCAAGG CGATCACGCG TTCGTTTTCC CCGAGGTCAA CGAAGCGATC
GTCGCGGAGA TCATGTCCGA CTGGACCGGC ATTCCGGTCG GCAGGATGGT GACGGACGAA
GTGTCCGCCG TGCGCGCCTT GCCGGACACG CTCGCCGCCC GCGTGATCGG TCAACGCGAT
GCGTTGCATC AGATTGGCGA TCGGGTGCAA ACGGCGCGCG CCGGATTGAC CGATCCGAAG
AAGCCGCTCG GCGTGTTCCT GCTCGCGGGG CCGTCGGGCG TCGGCAAGAC GGAGACGGCA
TTGGCGCTTG CCGAGGCGCT GTACGGCGGC GAGCAGAATC TCATCACGAT CAACATGAGC
GAATATCAGG AGGCGCATAC GGTATCGGGG CTGAAGGGCG CCCCGCCGGG TTACGTCGGA
TACGGCGAGG GCGGCGTGCT GACCGAGGCG GTGCGCAGGC GTCCGTATTC CGTCGTGCTC
CTCGACGAGA TCGAGAAGGC GCATCCCGAC GTCCACGAGA TGTTCTTCCA GGTATTCGAC
AAGGGCTACA TGGAGGACGG CGACGGGCGC TATATCGATT TTCGCAACAC GACGATTCTT
CTCACCAGCA ATGCAGGCTC CGACCTCGTG TCCGGACTGT GCATGGACGA GGCTTGCGCC
CCCGACGCGG ACGGCCTTTG CGCCGCGCTC GCTTCCGAAT TGCTCAAGAC GTTTCCCGCG
GCGTTTCTCG GGCGCGTGAC GCTGGTGCCC TATCGTCCGC TCGCGCAGGA AACGCTATCG
CGCATCGTCC GGCTGCATCT GGACCGAGTG GTGACGCGAA TGGCCGAGAA TCAGGCTGTC
GCCCTGCGTT ATTCGGACAA TGTCGTCGAT TACGTCGTCA ACCGCTGCCT CGTGCAGGAA
ACGGGGGCGC GCTTGCTGAT CGGCTTCATC GAGCAGCACG TGTTGCCGCT GCTCGCGAAG
CTTTGGCTGG ATTCGCTTGC GTCCAAGCAC GTGCTGACAC GCGTCGACCT CGACATGGCC
GATCCCGCCG CGGCCCCGGC CGAAGCGTTC GCGCTGCGCG CTTCATGA
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| Protein sequence | MCANVAYSRI HDRDMTVSRQ ALFGKLGYSL FRSIESATAF CKLRGNPYVE LVHWLHQMLQ
AADGDMQRIA RHCDIDLGEL ERDMVRALGE LPAGASSISD FSHHIETAIE RAWVLATLDF
GDRRIRGAWL LAALLKTPEL RRVLLSISSA FGRIRVDELD AMLPAWIDGS PEANETPYDN
SDFGAAIPGE ASSAMQQKGG GSPLEQFCLD LTARARAGQI DPVVGRELEI RTMIDVLLRR
RQNNPLLTGE AGVGKTAVVE GLARAIAAGD VPPKLADARL LSLDVGALLA GASMKGEFEA
RLKGVLEAAA KATLPVILFV DEIHTLIGAG GQAGTGDAAN LLKPALARGT LRTIGATTWA
EYKRHIEKDP ALTRRFQVLQ VPEPDEAAAI DMVRGLTRTF SRHHGVVVLD EAIRAAVKLS
HRYIPSRQLP DKAISLLDTA CARVALSQHA PPRELQDVRR RLEAARVRLE LLDGEQRIGL
GDEAALAQSR AEIAALEVEE QSIDACWRQQ IEAAQTLLSA REAAGDAAAS AIDALRELEH
ALSNLQGDHA FVFPEVNEAI VAEIMSDWTG IPVGRMVTDE VSAVRALPDT LAARVIGQRD
ALHQIGDRVQ TARAGLTDPK KPLGVFLLAG PSGVGKTETA LALAEALYGG EQNLITINMS
EYQEAHTVSG LKGAPPGYVG YGEGGVLTEA VRRRPYSVVL LDEIEKAHPD VHEMFFQVFD
KGYMEDGDGR YIDFRNTTIL LTSNAGSDLV SGLCMDEACA PDADGLCAAL ASELLKTFPA
AFLGRVTLVP YRPLAQETLS RIVRLHLDRV VTRMAENQAV ALRYSDNVVD YVVNRCLVQE
TGARLLIGFI EQHVLPLLAK LWLDSLASKH VLTRVDLDMA DPAAAPAEAF ALRAS
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