| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0143 |
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| Symbol | |
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| ID | 4906293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 128568 |
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| End bp | 131258 |
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| Gene Length | 2691 bp |
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| Protein Length | 896 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640143250 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001074186 |
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| Protein GI | 126457271 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.420233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAACC ATTTTTCGAA CGGACGGACG AATCAAAGCC GCACGGTAGT GATCCGCAGC
GGTGCGATGC CGCGGCTGCT CGGTCAGCCC GCGCTCGAGT TCCTGTCGCT GCGCGGTGAA
GAGCACCTCG GAAAACTCTA CACGTACGAA TTGCTCCTGC GCACGCCGGA CGATTTTCAT
GTGCCGTTGG CAACGAGCGC GAATCTCGAC CTGAAGGCGA TGATCGGCAC GGAGATGACG
GTCTGCATTC AGCTCGACGG AATCGGGACG GGCGCGCAAG GCGGCGTTGG CGCGGGTGCG
CGCGAAATCA GCGGGCTCGT GGTCAAGGCG GGCTTCCTGC GCTGCGAGGG GCGCTACAAC
GTCTATCGCA TCGAGCTGCG CCCCTGGCTG TGGCTCGCGA CTTTGACGAG CGACTACAAG
ATTTTTCAGG ACAAGAGCGT CGTCGAAATC ATCGATACGG TCTTGCACGA TTACCCTTAC
CCGGTCGAGA AGCGGCTCGA CATCGACAAG TATTCGGTGG CGGGCGAGAG CGCTCGAAAC
GAGCCGCGCG CGTTCCAGGT GCAATATGGC GAAACCGATT TCGACTTCGT TCAGCGTTTG
ATGGAGGAGT GGGGGATCTA CTGGTTCTTC GAGCATTCGG ACAACAAGCA TCGCCTGGTC
TTGTGCGATC ACATCGGCGG GCATCGCAAG GCGCCGAGCG AGGCCTATCA CGAGATCGCG
CATCACCCGG AAGGCGGGAA GATCGACATC GAGTACATCA ACTATTTCTC GACGGACGAA
GCGCTGCGGC CCGGCCGCGT CGTGATAGAC GATTTCGACT TCACGCGTCC GCTCGCGAGC
CTCGTCACGT CCAATCACCA GCCGCGGGAG ACGAACTGGG GGGAGGGCGA GCTGTTCGAA
TGGCCGGGCG ACTATACCGA TAGCAAGCAT GGCGATCTCA TCAGCCGCGT GCGCATGGAA
GAGCGCCGCG CGACCGGGTC GCGCGCATAC GGTCGGGGCA ACGTGCGCGG CCTCGCCTGC
GGTCATACGT TCGTGCTGTC GAAGCACAAG CACGACGGCG CGAACCGCGA GTACCTCGTC
ATCGAATCGG CGTTGATGCT GACCGAAGTC GCGGACGAAA CGGGCAGCGG CTACCGCTAC
GAATGCGATA ACGAACTGGT CGTGCAGCCG TCGAACGAGG TGTTTCGAAT GCCGCGCGAA
ACGCCCAAGC CGACGACGAG CGGGCCACAG TCCGCGATCG TGGTCGGGCC GCCGGGCCAC
GAGGTATGGA CCGACGAATT CGGCCGCGTG AAGATCCGTT TTCTGTGGGA TCGCTACGCA
CGCAATGACG CAACGGATTC CTGCTGGGTA CGCGTGAGCC AGGCGTGGGC CGGCGTGAAC
TTCGGCGGCA TCTACATTCC GCGGATCGGA CAGGAAGTGA TCGTCGGATT CATGAACGGC
GATCCGGACC GTCCGCTGAT TCTCGGCAGC CTCTACAACA CCATTACGCC GCCGCCTTGG
GATCTGCCCG GCGACGCGAC GAAGAGCGGA TTCAAGAGCA AGTCGATCAC GGGCGGGCGC
GAGAACTATA ACGGCATCCG CTTCGAGGAC AAGCTGGGGG CCGAGGAATT TCACATGCAG
GCGGAAAAGG ACATGAACCG CCTGACGAAG AACGACGAGT CGCATACGGT CGGCGCGAAT
TTTTCGATCG GCGTCGGGCT TACCCATACG CGCGCGGTGG GCGCCATGTT CAGCAGCATC
GTCGGCGGAG CCGCCAGCTA TGCGGTGGGG GGCGCGGAAT CGACGATGAT CGGCGGCGCG
TATGCGTTGA ACGTCGGCGG CGCGCACGCG GTTGCGGTGG GCGGCGCGTC GTCCGTTTCC
GTTGGCGGCG CCTACGCGCG CAACGTGGGC GGCGCGTATG CGCTGACAGT CGGCGGCGTG
CTGTCGATCG TCTGCGGTGC GTCTTCGATC ACCATGACGG CTTGCGGCTC GATCAAGATC
GTCGGCAAGA ATATTCGCAT CATCGGCAGC GACGAAGTCG TCGTGCAAGG CGCGCCCCTG
CAACTGAATC CGGGCGATTC GGATTGCGGC GGAGGGGGCG GCGGCGGAGG CGGCGGCGGC
GCGATTCCGC CGATTCCGTT GCCGTCGTTC TTCCTCGATA TCACGAAGCC GATTCTTCCG
CCGCCGCCGC CGCCACCGAC GGAGGTGCCA CCGGATCCGA CGCCGACGCC CACGCCGACG
CCGACGCCGA CGCCCACGCC GACGCCGACG CCGACGCCCA CGCCGACGCC GACGCCGACG
CCCACGCCGA CGCCGACGCC GACGCCCACG CCGACGCCCA CGCCCACGCC CACGCCGACG
CCGACGCCGA CGCCGACGCC GACGCCGACG CCCACGCCGA CGCCCACGCC CACGCCGACG
CCCACGCCCA CGCCGACGCC CACGCCGACG CCCACGCCGA CGCCAACGCC AACGCCAACG
CCAACGCCGA CGCCCACGCC CACGCCGACG CCCACGCCGA CGCCAACGCC GACGCCGACG
CCGACGCCGA CGCCGACGCC GACGCCCACG CCGACGCCCA CGCCGACGCC CACGCCCACG
CCCACGCCGA CGCCAACGCC AACGCCCACG CCGACGCCCA CGCCCACGCC GACGCCGACG
CCGACGCCAA CGCCAACACC AACGCCAACT CCGACTAGTT CCGAGATTTA A
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| Protein sequence | MPNHFSNGRT NQSRTVVIRS GAMPRLLGQP ALEFLSLRGE EHLGKLYTYE LLLRTPDDFH
VPLATSANLD LKAMIGTEMT VCIQLDGIGT GAQGGVGAGA REISGLVVKA GFLRCEGRYN
VYRIELRPWL WLATLTSDYK IFQDKSVVEI IDTVLHDYPY PVEKRLDIDK YSVAGESARN
EPRAFQVQYG ETDFDFVQRL MEEWGIYWFF EHSDNKHRLV LCDHIGGHRK APSEAYHEIA
HHPEGGKIDI EYINYFSTDE ALRPGRVVID DFDFTRPLAS LVTSNHQPRE TNWGEGELFE
WPGDYTDSKH GDLISRVRME ERRATGSRAY GRGNVRGLAC GHTFVLSKHK HDGANREYLV
IESALMLTEV ADETGSGYRY ECDNELVVQP SNEVFRMPRE TPKPTTSGPQ SAIVVGPPGH
EVWTDEFGRV KIRFLWDRYA RNDATDSCWV RVSQAWAGVN FGGIYIPRIG QEVIVGFMNG
DPDRPLILGS LYNTITPPPW DLPGDATKSG FKSKSITGGR ENYNGIRFED KLGAEEFHMQ
AEKDMNRLTK NDESHTVGAN FSIGVGLTHT RAVGAMFSSI VGGAASYAVG GAESTMIGGA
YALNVGGAHA VAVGGASSVS VGGAYARNVG GAYALTVGGV LSIVCGASSI TMTACGSIKI
VGKNIRIIGS DEVVVQGAPL QLNPGDSDCG GGGGGGGGGG AIPPIPLPSF FLDITKPILP
PPPPPPTEVP PDPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT
PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT
PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTSSEI
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