| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A0100 |
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| Symbol | |
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| ID | 4905828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 88347 |
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| End bp | 91127 |
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| Gene Length | 2781 bp |
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| Protein Length | 926 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640143207 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001074143 |
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| Protein GI | 126457812 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCAATT TGAACGATAC GCTACGCAAT TTTGCGTCGG GGGCGGTCGA CTGGAATAAA
CGTCCGGTCG CGTTGCACTT TGGCGCCGCG CAGGCCGCGC TGGGCCACCT CCTCGCGCTG
CAGCACGCCA GTGTTCAGGA AGGCCTGATG ACCGGGATCC ACGGCCGATT GACCTGCGTG
TCGACCCGCC GCGACCTTCC GCCCGGCGTG TTGCTCGGCA TTCCGGTTTC GATCCGGCTC
ATTACCGACC GCGGACAGCC GCACACGGTG AACGCGATCA TCAGCGGCGT CCAGATCGGC
CAAAGCGACG GCGAGCTCTG TGTGTACCAG CTGACGGTCT GCGACGCGCT GTCGCTGATG
GACAAGCGCA CCAATTCGCG GGTCTTCCGA AAGCGCAGCG TCATCGATGT GCTCGCCACG
CTGTTCAACG AATGGCAGCA GCGCAGCCCG GCCCTCGCGC GCGCGTTCGA ATTCGATCTG
TCCGGCTTGC GCGCCGATCG CTATCCGCCC CGCGAGCTGA CCCGGCAGGT CAACGAATCG
GATGCGCATT TCGTGCGCCG TCTGCTGCGC CGCGAAGGGA TCACCGTGTT CGCGAAGGCG
GGGCCGGCGA AGGGCGAACG GCCGTTGCAG GGCGACGCGC CCGTGCACAC GCTCGTGTGC
TGTGACGATC CGATGTCGTT GCCGCAAGCG CCGGCCGGCA CGGTCCGCTT GCATCCGCGC
GACGGCGGCG CCGCGCAGCG CGACACGGTC ACGCTGTTCG CGCTGCGTCG GCAATTGGCG
CCCGGCAAGG CCGGGCGCCC GTCGTGGGAC TACAAGAAGG CGCGGATCGA CGAATCGAGC
GTCGCTTCGA GCCTCGATCA GGGCGAGGCG GGCAACGATC TGGCGAAGCT GCTGACCGAC
ATCGCGATCG ACATTGCGCA CGCGGGCGAT TCATGGCGCG ATCACGAGCG GCTCACCCGC
GCGCGCATGC TCGCGCACGA GTTCGAAGCC GAGCGCCATG ACGGCGTCAG CAGCGTGCGG
GATCTCGCCG TGGGCACATG GATCACGCTG ACGGGCGATC CGCAATGGGA CAGGCAACGC
GCCGACAAGC GTCAGTTCGT GATCACGTCG ATCGATCACG ACATCTGGAA CAACCTGCCG
AAGGGGCTCA ACGAGCGCGT GCACGCGCTG TTCGCCGCGA GCCGCAATCT CGCGTGCGCG
CCCCGCGCGC TGCCGTCCGC GCTGGCGAAC GACGCGGATA CCCGCTACGA GAACACGTTC
GCGTGCGTGC GCCGCGGCGT GCCGCTTGCG CCCGCGTACG ATCCGCAAGC CGATTTGCCG
CCCGCGCATC TGCTCACGGG CACGATTGTC GGCGCGGAGG GCGAAGAAGT GTTCTGCGAC
GAAGACGGCC GGGTGCGCGT GCGGGTGCAC GGCCTCGATC CGGCGGATCA CGCGCACGCG
CAGGGCGCGG GCACCAACGG CAACGCGGGC GACAGCGCGC CGATCCGCGT GGCGTCGAGC
CTCGCCGGCG CCTATTTCGG CGCATCGTTT CTGCCGCGAG TCGGCATGGA AGTCCTTCTC
GGGTGTCTCG GCGGCGATCC GGACCGGCTG GTGATCATCG GCGTGCTCGG TAACGGCGCG
CATCCGCCGG CGACGTTCAG CCACGCGGGC GGGCTGCCGG GCAACCGCTA CCTGTCGGGC
ATCAAGACGA AGGAGATTCG TGGGCAACGG TACAACCAGC TGCGTCTCGA CGACACGCCG
AACCAGATCA GCGCGCAACT GGCGAGCGAG CACGCGCATT CGCAGCTCAA TCTCGGATAT
CTGACGCAAC CGCGCGAGAA CGGCCACGGG AACGACCGCG GCGAGGGCGT GGAGTTGCGT
ACCGACGCGG CGGCGGCGCT GCGGGCGGCG CAAGGCATGC TGCTGACGAC CTACGCGCGC
ACGCAGGCGA GCGGCGGGCA ACTGGACCGT GACGAGCTGA TTCGGTTGCT CGGCGAATGC
GCGGAGCTGT TCAAGGCGCT GGGCGACTAC GCGGGGCAGC ACGGCGGGCA GGCCGTGGAT
ACGGCCGGCC AGCACGCGGT GGCCGCCGCG TTCAAGCGCT GGGCGCCGGG CACGGACGGC
GCCGATGCGC CGTCCGACGG CGCAGCGCGC GCGCTGATGG CGTTCGGCGC GCAGGCCGGT
TCGGTGAACG TCACGCCGAA GACGCATGTG ACGTATGCCG GCGAGAACAT CGATCAGGTC
GCGCAGCAGC ACCTGCAACT GATGAGCGGC CAGCGGCTGA ACGCGACGGC CGGGCAGGGC
ATGCAGCTCT TCGCGCGGGG CGCGGGGGTG CAGGCCGTGG CGGGCGAAGG GCCGATGCTG
CTGCAGGCGC AAGCCGGCAC GCTGACGGCG AACGCGCAGA AGGGCGTCAA GATCACGACG
AACGAGCACG AGGTGTTCGT GAGCGCGCCG AAGATTCGGC TCGTTGCCGA GGACGGCAGC
TACCTCGAGC TCGGCGGCGG CATCACGCTC GGCACGAACG GCGACATCAA GCTGCTGTCG
GCGTCGCACC AGTGGGGCGG GCCGTCGACC GCGCAGGCGG CGAAGAGCGG GTTCGGCAAT
CAGCCGACGG ATCAGCGTTT CAAGCTGCAC TATCCGGGCG AGGACGGCGA TTTGCAGGCG
GCGGCGAACA AGCGGTTCCG GATCACGCTG GACGACGGGC GCGTCATCGA AGGCAAGACC
GACGCGAGCG GCCTGACGGA TCTGGTCAAG GACGACGCGA TGCGTATCGC GAAGATCGAC
TATCTGAAGC CGAAGCTCTG A
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| Protein sequence | MTNLNDTLRN FASGAVDWNK RPVALHFGAA QAALGHLLAL QHASVQEGLM TGIHGRLTCV
STRRDLPPGV LLGIPVSIRL ITDRGQPHTV NAIISGVQIG QSDGELCVYQ LTVCDALSLM
DKRTNSRVFR KRSVIDVLAT LFNEWQQRSP ALARAFEFDL SGLRADRYPP RELTRQVNES
DAHFVRRLLR REGITVFAKA GPAKGERPLQ GDAPVHTLVC CDDPMSLPQA PAGTVRLHPR
DGGAAQRDTV TLFALRRQLA PGKAGRPSWD YKKARIDESS VASSLDQGEA GNDLAKLLTD
IAIDIAHAGD SWRDHERLTR ARMLAHEFEA ERHDGVSSVR DLAVGTWITL TGDPQWDRQR
ADKRQFVITS IDHDIWNNLP KGLNERVHAL FAASRNLACA PRALPSALAN DADTRYENTF
ACVRRGVPLA PAYDPQADLP PAHLLTGTIV GAEGEEVFCD EDGRVRVRVH GLDPADHAHA
QGAGTNGNAG DSAPIRVASS LAGAYFGASF LPRVGMEVLL GCLGGDPDRL VIIGVLGNGA
HPPATFSHAG GLPGNRYLSG IKTKEIRGQR YNQLRLDDTP NQISAQLASE HAHSQLNLGY
LTQPRENGHG NDRGEGVELR TDAAAALRAA QGMLLTTYAR TQASGGQLDR DELIRLLGEC
AELFKALGDY AGQHGGQAVD TAGQHAVAAA FKRWAPGTDG ADAPSDGAAR ALMAFGAQAG
SVNVTPKTHV TYAGENIDQV AQQHLQLMSG QRLNATAGQG MQLFARGAGV QAVAGEGPML
LQAQAGTLTA NAQKGVKITT NEHEVFVSAP KIRLVAEDGS YLELGGGITL GTNGDIKLLS
ASHQWGGPST AQAAKSGFGN QPTDQRFKLH YPGEDGDLQA AANKRFRITL DDGRVIEGKT
DASGLTDLVK DDAMRIAKID YLKPKL
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