Gene Mjls_5529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5529 
Symbol 
ID4881226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5784640 
End bp5785509 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content69% 
IMG OID640142846 
Productrhomboid family protein 
Protein accessionYP_001073783 
Protein GI126438092 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.360648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATC CCCAGTACCC GCAGTCACCC GCCCAGGCGC CGACCTGCTA CCGGCACCCC 
GACCGCCAGA CCTACGTGCA GTGCACCCGC TGCGGACGGT TCATCTGTCC GGAGTGCATG
CGGTCGGCCG CCGTCGGGCA CCAGTGCCCC GACTGCGTCG GCGAGGCGGC GCGGTCCGCG
CCGCAGGCCC GCGCCCCGTT CGGCGGTCGG CTGTCGGACT CCAAACCGGT CGTGACCTAC
GCCCTCATCG CGGTCAACGT GCTGGTGTTC CTGATGCAGA CGACGTCAGG GCAGTTGGAG
CGCGAATTCG TGCTCTGGAC GCCCGGCGTC GCCGACGGTG AGTGGTACCG CCTGGCCACG
TCCGCGTTCC TGCACTACGG GGCGATGCAC CTGTTGTTCA ACATGTGGGC GCTCTACGTC
GTCGGGCCGC CGCTGGAGAT GTGGCTGGGC CGGCTGCGCT TCGGGGCGCT CTATGCGCTC
AGCGCGCTGG GCGGGTCCGT GCTGGTCTAC CTGCTCTCAC CGATCAACGC CGCGACCGCG
GGCGCGTCCG GCGCGGTGTT CGGCCTGTTC GGGGCGATGT TCGTGGTGGC CCGCAAACTG
AACCTGGACA TCCGCGGAAT CGCGGCGATC ATCATCCTCA ACCTGGTGTT CACGTTCGTG
TACCCGCTGA TCAGCGGTCA GGGCATCAGC TGGCAGGGCC ACGTGGGCGG GTTGGTCACC
GGTGCGGCGA TCGCCGGCGT GTACGCCTAC GCGCCCGCCG GCCGCCGCAA CCTCGTGCAG
GGTGGCGTGA CCGCCGCGGT GCTGCTGTTG TTCGTGGTGC TGATCTGGTG GCGGACGGAG
GAGATCTTCG CGATGTTCGG CGTGCGCTGA
 
Protein sequence
MSYPQYPQSP AQAPTCYRHP DRQTYVQCTR CGRFICPECM RSAAVGHQCP DCVGEAARSA 
PQARAPFGGR LSDSKPVVTY ALIAVNVLVF LMQTTSGQLE REFVLWTPGV ADGEWYRLAT
SAFLHYGAMH LLFNMWALYV VGPPLEMWLG RLRFGALYAL SALGGSVLVY LLSPINAATA
GASGAVFGLF GAMFVVARKL NLDIRGIAAI IILNLVFTFV YPLISGQGIS WQGHVGGLVT
GAAIAGVYAY APAGRRNLVQ GGVTAAVLLL FVVLIWWRTE EIFAMFGVR