Gene Mjls_5323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5323 
Symbol 
ID4881020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5575311 
End bp5576780 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content68% 
IMG OID640142636 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001073577 
Protein GI126437886 
COG category[T] Signal transduction mechanisms
[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTTTC TTCGGGCGCT CCTGCTGCTG CTCGCCGTCC TGACCGTGGC GTCCTGCGCA 
TCGGCGGATG ACGGCAGCGA CGAGCCGATC AAGTCGGCGG GCGTGCTGCG GGTCGGCACC
GAGGGGGTCT ACGCCCCGTT CAGCTATCAC GACGCCTCCG GTCAACTGGT CGGCTACGAC
GTCGACGTGG CGCGCGCGGT GGCCGACAAG ATCGGGGTGC GCGCCGAGTT CGTGGAGACG
CCGTGGGACG CGATGTTCGC CGCCCTGGAG GCGGGCCGGT TCGACGTGGT CGCCAACGAG
GTGACCATCA ACGCCGAGCG GCGGGCGAAA TACGACCTGT CACAACCGTA TTCGGTGGGT
GAGGGAGTGA TCGTCACCCG CGCCGACGAC GATTCGATCG CCACGCTCGA CGATCTCGCG
GGCAAGGTCG CCGCCGAGAA CGCGACCAGC AATTGGTCGG AGGTCGCGCG TGAGGCCGGG
GCGCGGGTGG AGGCCGTGGA GGGTTTCACC CAAGCCATCA CGCTGCTCAA CCAGGGCCGG
GTCGACGTCG TCGTCAACGA CAGCATCGCG GTGTACGCCT ACCTCGCCGA AACGGGCGAC
ACCTCGGTGA AGATCGCGGG CACGGTCGGC GAGAAGAGCG AACAGGGCTT CGCCGCCCGC
AAGGACAGCG GCCTGCTGCC CGAACTCAAC CGGGCACTCG ACGAACTGCG CGCCGACGGC
ACGCTTGCCG AGATCTCCCA GCGGTACCTC AAGGCCAACG CCTCAGGTGC GCCGGAGTCC
GATCAAGCGG ACACCGCGGG CGCTCCCCGT TCCACGTGGC AGCTGATCCT CGACAACCTG
TGGCCGCTCG CGCGGGCGGC GCTGACGATG ACGATCCCGC TGACAGTCAT CAGCTTCGCT
ATCGGTCTGG TGATCGCGCT CGGGGTCGCG CTGGCCCGGT TGTCGCCGAA TGTGGTGCTG
ACCAACGTCG CCCGCTTCTA TATCTCGATC ATCCGCGGCA CCCCACTGCT CGTGCAGTTG
TTCATCGTGT TCTTCGCGCT GCCGGAGTTC GGGATCCGGA TCGACCCGTT CCCGGCGGCG
GTGATCGCGT TCTCGCTCAA CGTCGGCGGG TACGCCGCCG AGATCATCCG CTCGGCGATC
CTGTCCATCC CGAAGGGTCA GTGGGAGGCC GCCGAGACGA TCGGCATGAA CTACCCGACG
TCGCTGCGCC GCATCGTGCT GCCGCAGGCC GCCCGGGTGG CCGTACCGCC GCTGTCGAAC
ACGCTGATCT CCCTGGTCAA GGACACCTCA CTGGCGTCGA CCATCCTGGT GACCGAACTG
CTGCGGCAGG CGCAGATCGT CGCGGCCCCG ACGTTCGAGT TCTTCGCGCT GTACGGCACC
GCCGCGGTGT ACTACTGGGT GATCTGCCTG GTGTTGTCGT TCGGTCAGGG CCGCATCGAG
CGCCGGCTGG AAAGGTACGT GGCGAGATGA
 
Protein sequence
MRFLRALLLL LAVLTVASCA SADDGSDEPI KSAGVLRVGT EGVYAPFSYH DASGQLVGYD 
VDVARAVADK IGVRAEFVET PWDAMFAALE AGRFDVVANE VTINAERRAK YDLSQPYSVG
EGVIVTRADD DSIATLDDLA GKVAAENATS NWSEVAREAG ARVEAVEGFT QAITLLNQGR
VDVVVNDSIA VYAYLAETGD TSVKIAGTVG EKSEQGFAAR KDSGLLPELN RALDELRADG
TLAEISQRYL KANASGAPES DQADTAGAPR STWQLILDNL WPLARAALTM TIPLTVISFA
IGLVIALGVA LARLSPNVVL TNVARFYISI IRGTPLLVQL FIVFFALPEF GIRIDPFPAA
VIAFSLNVGG YAAEIIRSAI LSIPKGQWEA AETIGMNYPT SLRRIVLPQA ARVAVPPLSN
TLISLVKDTS LASTILVTEL LRQAQIVAAP TFEFFALYGT AAVYYWVICL VLSFGQGRIE
RRLERYVAR