Gene Mjls_4715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4715 
Symbol 
ID4880414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4960705 
End bp4961454 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID640142020 
Productshort chain dehydrogenase 
Protein accessionYP_001072971 
Protein GI126437280 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTC AGAGGATCCT GATCACCGGC GCGAGCTCCG GGCTGGGCGC CGGGATGGCC 
CGCGCGTTCG CCGCCAAGGG GCGTGACCTG GCGCTGTGCG CCCGCCGCGT CGACCGTCTC
GACGAACTCA AAGCCGAACT GACGCAACGG TATCCGGAGA TCACCGTCGC AGTGGCCGAA
CTCGACGTCA ACGACCACGA CCAGGTGCCG AAGGTGTTCG CCGCGCTGTC CGACGAACTC
GGCGGCCTCG ACCGTGTGAT CGTCAACGCC GGTCTCGGCA AGGGCGCACC GCTCGGGTCG
GGCAAGCTGT GGGCCAACAA GGCGACCATT GAGACCAACC TCGTCGCGGC GCTCGTGCAG
ATCGAGACGG CGCTGGAGAT GTTCAAGCGC ACCGGTGCCG GGCACCTCGT GCTGATCTCG
TCGGTGCTGG GCAACAAGGG CGTGCCCGGG GTGAAGGCCG CCTACGCCGC GAGCAAGGCC
GGCGTCTCGT CGCTGGGGGA GTCGCTGCGC GCCGAATACG CCAAGGGTCC GATCCGCGTG
ACGGTCCTCG AACCCGGTTA CATCGAGTCG GAGATGACCT CGAAGTCCGC GTCGACGATG
CTCATGACCG ACACCGATAC CGGCGTCGCC GCAATGGTTC GCGTCATCGA GAAGGAGGCC
GGCCGCGCCG CCGTGCCGTG GTGGCCGTGG GCGCCGCTGG TGCAGCTGAT GCGGGTCCTA
CCGCCGCGGC TCACGCGACT CTTCGCGTGA
 
Protein sequence
MTRQRILITG ASSGLGAGMA RAFAAKGRDL ALCARRVDRL DELKAELTQR YPEITVAVAE 
LDVNDHDQVP KVFAALSDEL GGLDRVIVNA GLGKGAPLGS GKLWANKATI ETNLVAALVQ
IETALEMFKR TGAGHLVLIS SVLGNKGVPG VKAAYAASKA GVSSLGESLR AEYAKGPIRV
TVLEPGYIES EMTSKSASTM LMTDTDTGVA AMVRVIEKEA GRAAVPWWPW APLVQLMRVL
PPRLTRLFA