Gene Mjls_4400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4400 
Symbol 
ID4880105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4635851 
End bp4636552 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content72% 
IMG OID640141708 
ProductFis family transcriptional regulator 
Protein accessionYP_001072662 
Protein GI126436971 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4565] Response regulator of citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.328489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACTC GGCCGATCTC GGTGCTCATC GTCGAGGACG ATCCGCTGAT CGCCGAGGCC 
CACCAGACCT ACCTGTCGCG CCTGACCGGT TTCGCCACCG CGGCGGTCGC GCACACCGCG
CGCGACGCGA TGCGGGCGGC GTCGGAGGCG GCGACCGGTG AGCACCCGAT CGATCTGGTG
TTGCTCGACC TCGGCCTGCC GGACGCCACC GGGATCTCGC TGGCCTCGGC GCTGTCGGGG
CTGCGCCCGG CACCGGACAT CATCGCGATC ACCTCGGAGC GCGACCTGGA GATGGTGCGG
GCGGCGGTAT CGCACGGCGC GCTGGCGTAC CTGCTCAAAC CGTTCACCTT CGCGGCGTTC
CGGGACCGGT TGGAGCGCTA CCGGCGCTAC CGCGACGCGC TGCCCGCGGG TATCGACGCG
GCCAGCCAGA CCGAGGTCGA CCGGGCCCTC GCCGAACTCC GGGGTTCCGC CGACCGGGCC
ACGGCACCCA AGGGCACCGC ACCGGGCACC AATGACGAGA TCGCCAGGGC GGTGCGCGAT
TCCGCCGACG GGCTCACCGC GGACCAGGTC GCCTCACAGG TGGGCGTGTC CCGGGTGACG
GCATGGCGCT ACCTCGAGCG GCTTGCCGAC GACGGCACCG TCACCCGCCT CACCGACTAC
GGCAGGGCGG GGCGGCCCAA GACGCGTTAT CAGTGGCGTT AG
 
Protein sequence
MSTRPISVLI VEDDPLIAEA HQTYLSRLTG FATAAVAHTA RDAMRAASEA ATGEHPIDLV 
LLDLGLPDAT GISLASALSG LRPAPDIIAI TSERDLEMVR AAVSHGALAY LLKPFTFAAF
RDRLERYRRY RDALPAGIDA ASQTEVDRAL AELRGSADRA TAPKGTAPGT NDEIARAVRD
SADGLTADQV ASQVGVSRVT AWRYLERLAD DGTVTRLTDY GRAGRPKTRY QWR