Gene Mjls_4237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4237 
Symbol 
ID4879942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4473643 
End bp4475421 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content66% 
IMG OID640141545 
Productlong-chain-acyl-CoA synthetase 
Protein accessionYP_001072499 
Protein GI126436808 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[I] Lipid transport and metabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.168634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG AGAAATCGGG GACTCGTAGC AGCGTCGGTT TGCTGGACAT CGCCGCGAGG 
TTGCCGGGGT TCCTCATGGA CGTGCCGACG ATCCTGGGCG GCGTCGTCAC CGGGTTCGGG
GCCAGGCCGT CGGCGAAGAC GTCGATCGGC AAGGTCTTCC AGGAGCGGGC CGCCAAGTAC
GCCGACAAGA CCTTCCTCAG GTTCGAGGAC CGCGACATCT CCTACCGGGA GGCCAACGAG
ACGGTCAACC GCTACGCCGC CGTACTGGCC GACCGCGGAG TCGGCCGCGG TGACGTCGTG
GCGATCATGC TGCGCAACTC ACCCGAACCC GTGCTGCTCA TGCTGGCGGC CGTCAAATGC
GGCGCTATCT CCGGGATGCT CAACTTCCAC CAGCGCGGCG ACGTGCTCAA GCACAGCCTC
GGCCTGCTCT CGGCCAAGGT CGTGATCGCC GACCCCGACT TCGTCGACCC GATCAAGGAA
TGCGGCGCCG ACACCGACGG TCTGCTGACG ATCGAGGAGT TCGAGGAGCT CGCGGAGGGC
GCCCCGACCG ACGACCCGGA ATCGGCGTCG GCCGTCCTCG CCAAGGACAA GGCGTTCTAC
ATCTTCACCT CGGGCACCAC CGGGATGCCG AAGGCCAGCG TGATGACGCA CTACCGCTGG
CTGCGCGCAC TGGCCGGCTT CGGCGGGCTC GGTGTGCGGC TGAGCAGCAA GGACACCATG
TACTGCTGCC TGCCGCTGTA CCACAACAAC GCGCTGACGG TGGCGCTGTC GTCGGTGCTG
AACTCCGGCG CGACACTCGC GCTGGGCAAG TCGTTCTCGG CGTCGAAGTT CTGGGACGAC
GTCATCCGTT ACGACGCCAC CGCATTCGTC TACATCGGTG AGATCTGCAC CTACCTGCTC
AACCAGCCGA AGAAGGACAC CGACCGCAAG CACAAGGTCC GCGTCATCGC GGGCAACGGT
CTGCGCCCGG CGATCTGGGA CGAGTTCACC AACCGGTTCG GTATCGACCG GGTGTGCGAG
TTCTACGCCG CCAGCGAGGG CAACACCGCC TTCGTCAACG CCCTCAACGT CGACAAGACC
ACCGGCATGT GCCCGACCCC GGTCGCGTTC GTCGAATACG ACGGCGACTC GGGAGATCCG
GTCCGCGACG AGAAGGGCCG GGTCAAGAAG GTCCGCACGG GTGAGCCGGG GCTGCTGTTG
AGCAAGGTCA GCAACTTCCA GCCCTTCGAC GGCTACACCG ACGAGAAGGA GTCCGAGAAG
AAGCTCGTTC GCGACGCCTT CAAGGACGGC GACGTGTGGT TCAACACCGG CGACCTGATG
CGCTACCAGG GTCTCGGGCA CGCTGCGTTC GTCGACCGCC TGGGCGACAC CTTCCGGTGG
AAGGGGGAGA ACGTCGCCAC CACCGAGGTC GAGGCGGCGC TGTCGTTGGA CCCGACGGTG
GACGAGTGCA CGGTCTACGG CGTCGAGGTG GAAGGCGCAG GCGGCCGGGC GGGTATGGCG
GCGATCAAGC TCAACGAGGG CTGCGACTTC GACGGCAAGA CGCTGGCGCA GACCCTCTAC
GACCGGCTGC CCTCGTACGC CGTACCGCTG TTCGTCCGCG TCGTCGGCGA ACTCGAGCAC
ACCTCGACCT TCAAGAGCCT CAAGGTCGAC CTGCGCAAGG AGGGCCACGG CAGCCACATC
GAGGATCCGC TGTACGTGCT CAAGAGCCGC GACGAGGGCT ACGTCGAGTA CTACGACGAG
TACGCCGAAG AGGTCAAGGA AGGCAAGAAG CCGAAGTAG
 
Protein sequence
MSDEKSGTRS SVGLLDIAAR LPGFLMDVPT ILGGVVTGFG ARPSAKTSIG KVFQERAAKY 
ADKTFLRFED RDISYREANE TVNRYAAVLA DRGVGRGDVV AIMLRNSPEP VLLMLAAVKC
GAISGMLNFH QRGDVLKHSL GLLSAKVVIA DPDFVDPIKE CGADTDGLLT IEEFEELAEG
APTDDPESAS AVLAKDKAFY IFTSGTTGMP KASVMTHYRW LRALAGFGGL GVRLSSKDTM
YCCLPLYHNN ALTVALSSVL NSGATLALGK SFSASKFWDD VIRYDATAFV YIGEICTYLL
NQPKKDTDRK HKVRVIAGNG LRPAIWDEFT NRFGIDRVCE FYAASEGNTA FVNALNVDKT
TGMCPTPVAF VEYDGDSGDP VRDEKGRVKK VRTGEPGLLL SKVSNFQPFD GYTDEKESEK
KLVRDAFKDG DVWFNTGDLM RYQGLGHAAF VDRLGDTFRW KGENVATTEV EAALSLDPTV
DECTVYGVEV EGAGGRAGMA AIKLNEGCDF DGKTLAQTLY DRLPSYAVPL FVRVVGELEH
TSTFKSLKVD LRKEGHGSHI EDPLYVLKSR DEGYVEYYDE YAEEVKEGKK PK