Gene Mjls_4166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_4166 
Symbol 
ID4879872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4401148 
End bp4402290 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content63% 
IMG OID640141475 
ProductFis family transcriptional regulator 
Protein accessionYP_001072429 
Protein GI126436738 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.802783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCT CATGGATGCG CGGTGCCCCA GGTGTCACAG TGTTCGTGAT GGCCGCGGTG 
GTACTCAGCG GCTGCGCCGA CTGGCGCGGC GCCAATTCCT TGCCCCTGCC CGGCACCGAA
GGTGGTGGCG ACGGCGCGTA CACCGTTCAG GCGCAACTGC CCGATGTCGA CAACATTGAG
CGCAATTCCC GCGTCCGGGT CGGTGACGTG ACCGTTGGCA ATGTCACCAA GATCGAGCGG
CAGGGCTGGA ATGCGTTGGT GACCATGGCC ATCGACAAAG ACGTCGACCT TCCGGCCAAC
GCGACCGCGA CAGTCGGCCA GACGAGTCTC CTTGGGTCGC TGCATATAGA ACTGGCCAGC
CCGACCGCCG TCCCGCCGGA AGGCCGGCTG CGCGACGGCT CGCTGATTCC GTTGTCGTCT
GGTGGCAGAT ACCCCAGTAC CGAGCAGACG TTGGCCGCGG TGTCACTGAT TCTCAACGGT
GGCGGTATCG GCCAGATTCA CGACATCACT CAGGCGTTGA GCACCGCCTT TCGCGGCCGG
GAAGAGGATC TGCGCAGTCT GATCAGCCAA CTGGACACGT TCATCCGGTA CACCAACGAA
CAGACCGACG ACATCATCGC GGCCACCGAG AGTCTGAATG ATCTGGTCGG TCAGTTTGCC
GACCAGAAAC CGGTGATCGA CAATGCGCTC AAGACGATTC CCGACGCGCT GGCCGTGGTA
CGGGATCAGC GACAAACCCT CGCCGATGCG CTCGACCGGC TGGGCCAGTT CAGTGCGTTG
GCCGCCGACT CGGTCAACCA GAGCAAAGAG AACCTGGTCA AGGAGCTCAA AGACCTCGGA
CCGGTGCTGG AGTCGCTGGC CAACGCCGGG CCGGCGCTGA CCCGTTCGAT GAGCTTCTTC
TCTGTCCTCC CGTGGCAGAA GGAGACAATT CCGAACTGGA TTCGAGGCGA CTACGCCAAC
CTCTCTGCGG TCATCGACCT GACCCTGAGC CGCCTTGATG CGGGCCTGTT CACCGGCACC
CGGTTCGAGG GGGCGTTGAC GAGGCTCGAA ATGCAGTGGG GTCGCACCAT CGGTCAGATG
CCGAGCCCGT ACACCGCCGG CAATCCGCTT GTCGTTCCAT ACCGTTGGGA TCAGGGGCCC
TAG
 
Protein sequence
MSRSWMRGAP GVTVFVMAAV VLSGCADWRG ANSLPLPGTE GGGDGAYTVQ AQLPDVDNIE 
RNSRVRVGDV TVGNVTKIER QGWNALVTMA IDKDVDLPAN ATATVGQTSL LGSLHIELAS
PTAVPPEGRL RDGSLIPLSS GGRYPSTEQT LAAVSLILNG GGIGQIHDIT QALSTAFRGR
EEDLRSLISQ LDTFIRYTNE QTDDIIAATE SLNDLVGQFA DQKPVIDNAL KTIPDALAVV
RDQRQTLADA LDRLGQFSAL AADSVNQSKE NLVKELKDLG PVLESLANAG PALTRSMSFF
SVLPWQKETI PNWIRGDYAN LSAVIDLTLS RLDAGLFTGT RFEGALTRLE MQWGRTIGQM
PSPYTAGNPL VVPYRWDQGP