Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_4139 |
Symbol | |
ID | 4879845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 4372602 |
End bp | 4373513 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640141448 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001072402 |
Protein GI | 126436711 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAG GCCCTCTGAC CGGCAAGGTC GTGCTCGTCA CCGGAGGCGG ACGGGGCATC GGCCGCGGCC ACTGCCTCGA GTTGGCCCGC CAGGGCGCGG CCGTCATCGT GAACGACCCC GGCGTTGGCC GGGACGGCTC CAGCGGTGAC GGAGCAGGTC CCGCGGCCGA CGTCGTCGCC GAGATCGAAT CGGCGGGCGG CAAGGCCATC GCGCATACCG GTTCGGTGTC CTCGTGGGAC GACGTGTCCG ACATGGTCTC CACCTCCGTC GACACGTTCG GCTCCTTGAC TGGTGTGGTC AACAATGCCG GCATCCTGCG CGACTCCATG GTCGCCGCAT CCAGCGAGGC CGACTGGGAC AGCGTGATCG CTGTGCATCT CAAGGGCACG TTCGCGGTCA CCCGGCATGC CTGTGAGTAC TGGCGGGCGC AGTCCAAGGC GGGCAATCCG ATTGACGCGC ACATCGTCAA CACGGTGTCC GGTGCGGGCT TGTGGGGCAA CGTCGGGCAG AGCGCCTACG GCGCGGCGAA GGCCGCCATC GCGAACCTGA CCATCGTCAC CGCGATGGAA GCACAGCGCT ACGGCGTTGC GGTCAACGCG ATCTCGCCGC TGGCCATGTC ACGGATGACC CAGGAGGTGT TCGGCGGCCG CGCTGACGAC CCCGCCCTGG ATCCCGCTCG CAGCTCCCCG GTGGTGGCCT GGTTGCAGTC CGCGCAGTCG TCGTGGCTGA CCGGACAGAT CCTGCGTATC AATGGCGACA AGCTCACCCG GATCAACGGC TTCACCGAGG CACCCGGCGC CTACCACGCC AAAGACGGTA CGTCCCTTGC ATTTTCGGAG ATCGGTCAGG CCGTCAGCTG GCTCTACGGC ACCGCACCGC GGGGACTGGC CGGGCCGCTA CCCGCTGACT AG
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Protein sequence | MAEGPLTGKV VLVTGGGRGI GRGHCLELAR QGAAVIVNDP GVGRDGSSGD GAGPAADVVA EIESAGGKAI AHTGSVSSWD DVSDMVSTSV DTFGSLTGVV NNAGILRDSM VAASSEADWD SVIAVHLKGT FAVTRHACEY WRAQSKAGNP IDAHIVNTVS GAGLWGNVGQ SAYGAAKAAI ANLTIVTAME AQRYGVAVNA ISPLAMSRMT QEVFGGRADD PALDPARSSP VVAWLQSAQS SWLTGQILRI NGDKLTRING FTEAPGAYHA KDGTSLAFSE IGQAVSWLYG TAPRGLAGPL PAD
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