Gene Mjls_3996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3996 
Symbol 
ID4879705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4228502 
End bp4229428 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content67% 
IMG OID640141308 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001072262 
Protein GI126436571 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.172958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.378531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCCA CCGCAGCGCC CGCCCCGCCG ACCGAGGTGC GCGGCGGCAG CGACGACTCC 
CGTTCGGACC GCCGGCTGGC CTTCATGCTG ATCGCCCCGG CGGTCGTGCT CATGCTCGCG
GTGACCGCCT ATCCGATCGG GTACGCGGTG TGGCTCAGCC TGCAGCGCTA CAACCTCGCC
GAACCCAGTG ACACCGAATT CGTCGGGTTG TCGAACTACG TCACGGTCCT GAGCGACCGG
TACTGGTGGA CCGCGTTCGC CGTCACCTTG GCGATCACCG TCGTCTCGGT CGCGATCGAG
TTCGTGCTCG GGATGGCCCT GGCCTTGGTG ATGCACCGGA CCATCTTCGG CAAGGGGGTG
GTGCGCACGG CGATCCTGGT CCCGTACGGC ATCGTCACCG TCGCGGCCTC CTACAGCTGG
TACTACGCGT GGACGCCCGG CACCGGATAC CTGGCCAACC TGCTGCCGGA GGGCAGCGCA
CCACTGACGG AGCAGCTGCC GTCGCTGGCC ATCGTGGTGC TCGCCGAGGT GTGGAAGACG
ACGCCGTTCA TGGCGCTGCT GTTGCTGTCG GGGCTCGCGC TGGTGCCGCA GGATCTGCTC
AACGCCGCCC AGATGGACGG TGCGGGGCCG TGGAAGCGGC TGGTGAAGGT CATCCTGCCG
CTGATCAAAC CGGCCATCCT GGTGGCGCTG CTGTTCCGCA CGCTGGACGC GTTCCGGATC
TTCGACAACA TCTACATCCT CACCGGCGGC GCCAACAACA CCGGGTCGGT GTCGATCCTG
GGCTACGACA ACCTGTTCAA GGCGTTCAAC CTCGGGCTCG GCTCGGCGCT CAGCGTCTTG
ATATTCCTGT GCGTGGCGAT CATCGCGTTC ATCTACATCA AGCTGTTCGG AGCGTCTGCG
CCCGGCTCGG ACGAGGAGAG GCGTTAG
 
Protein sequence
MTATAAPAPP TEVRGGSDDS RSDRRLAFML IAPAVVLMLA VTAYPIGYAV WLSLQRYNLA 
EPSDTEFVGL SNYVTVLSDR YWWTAFAVTL AITVVSVAIE FVLGMALALV MHRTIFGKGV
VRTAILVPYG IVTVAASYSW YYAWTPGTGY LANLLPEGSA PLTEQLPSLA IVVLAEVWKT
TPFMALLLLS GLALVPQDLL NAAQMDGAGP WKRLVKVILP LIKPAILVAL LFRTLDAFRI
FDNIYILTGG ANNTGSVSIL GYDNLFKAFN LGLGSALSVL IFLCVAIIAF IYIKLFGASA
PGSDEERR