Gene Mjls_3994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3994 
Symbol 
ID4879703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4226443 
End bp4227660 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content66% 
IMG OID640141306 
ProductABC transporter related 
Protein accessionYP_001072260 
Protein GI126436569 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.73747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.280943 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAA TCGTCTTGGA CAAGGTGACC AAGAGTTATC CGAACGGCGC GACGGCGGTG 
AAGGAACTGT CGATCACGAT CGCCGACGGC GAGTTCATCA TCCTGGTCGG ACCGTCCGGT
TGCGGGAAGT CGACGACGCT CAACATGATC GCCGGACTCG AGGACATCAC CTCCGGTGAA
CTGCGCATCG GCGGGCAGCG CGTCAATGAC AAGGCGCCCA AGGACCGCGA CATCGCGATG
GTGTTCCAGT CCTATGCGCT GTACCCGCAC ATGAGCGTGC GGCAGAACAT CGGCTTCCCG
CTCACGCTGG CGAAGGTCAA CAAGGACGAG ATCAACCGGA AGGTCGAGGA GACCGCGAAG
ATCCTCGACC TCACCGAACT GCTCGACCGC AAACCCGGTC AACTCTCCGG TGGGCAGCGC
CAGCGCGTGG CGATGGGACG CGCGATCGTG CGCAACCCCA AGGCATTCCT GATGGACGAG
CCGTTGAGCA ACCTCGACGC GAAGCTGCGT GTGCAGATGC GCTCGGAGAT CTCCCGGCTC
CAGAACCGGC TGGGCACCAC CACCGTCTAC GTCACCCACG ACCAGACCGA GGCGATGACG
CTCGGCGACC GCGTCGTGGT CATGCTCGCC GGGGTCGCGC AGCAGATCGG CTCGCCCGAA
GAGCTCTACA ACCGGCCGGC GAACCTGTTC GTCGCCGGGT TCATCGGCTC GCCCGCGATG
AATTTCTTCC CGGCGTCGCT GACCGACGTG GGGGTGCGCC TGCCGTTCGG CGAGGTCACG
CTGACCCAGG AGGCATACGA CCTGATCAAC CGTCGGGGTA AGCCCAAGAA CATCATCGTC
GGTGTGCGGC CCGAACACCT CGAGGACGCC TCGGTGCTCG ACGGCTACGC CCGGATCCGT
GCGCTGAACT TCGAGGTCAC CGCCGACATG GTGGAATCGC TGGGCGCGGA GAAGTACGTG
CACTTCCGCA CCGAGGGCGC GGGTGCCCGG TCCGCGCAGC TCGAGCAGCT CGCCGTCGAA
TCCGGTCAGG GTGAGAACGA GTTCGTCGCG CGGGTGTCCA CCGAATCCCC GGTCCGGCAG
GGCGACACGA TCGAACTGGC GCTCGACACC TCGAAACTGG TGATCTTCGA CGGTGATTCG
GGGGAGAACC TGACCATCCC CGACGAGCGC TCCGCGGAGC CGCCGGCGAT CGTGGAACCG
GCCAAGCCCG CCGAGTGA
 
Protein sequence
MAEIVLDKVT KSYPNGATAV KELSITIADG EFIILVGPSG CGKSTTLNMI AGLEDITSGE 
LRIGGQRVND KAPKDRDIAM VFQSYALYPH MSVRQNIGFP LTLAKVNKDE INRKVEETAK
ILDLTELLDR KPGQLSGGQR QRVAMGRAIV RNPKAFLMDE PLSNLDAKLR VQMRSEISRL
QNRLGTTTVY VTHDQTEAMT LGDRVVVMLA GVAQQIGSPE ELYNRPANLF VAGFIGSPAM
NFFPASLTDV GVRLPFGEVT LTQEAYDLIN RRGKPKNIIV GVRPEHLEDA SVLDGYARIR
ALNFEVTADM VESLGAEKYV HFRTEGAGAR SAQLEQLAVE SGQGENEFVA RVSTESPVRQ
GDTIELALDT SKLVIFDGDS GENLTIPDER SAEPPAIVEP AKPAE