Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_3945 |
Symbol | |
ID | 4879654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 4167405 |
End bp | 4169240 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640141257 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001072211 |
Protein GI | 126436520 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0762521 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGC TCGAGGTCTC CGGGTTGACG GTGACGTTCG CGACCGACAC CGAGCGGGTG GCCGCGGTGC GCGGCCTGGA CTACCGCCTC GACGCCGGTG AGGTGGTGGC GCTGGTCGGC GAGTCCGGGG CGGGCAAGTC GGCGGGCGCG ATGGCCGTCG CGGGGCTGCT GCCCGAACAT GCCGAGGTGG CCGGGTCGGT GCGGCTCGAC GGCACCGAAC TGCTCGGGCT CTCCGACGCC GAGATGTCGA AGATCCGGGG ACGCCGGATC GGCACGGTGT TCCAGGACCC GATGTCGGCG CTCACGCCGG TGTACACCGT CGGCGACCAG ATCGCGGAGG CCCTGCGCGT GCACAACCGC GACCTCGACC GCCGCGCCGC GCGCACCCGC GCGGTCGAAC TGCTCGAACT GGTCGGCATC GCCCAGCCGG AGCGCCGCGC CCGGGCGTTC CCGCACGAAC TGTCCGGCGG CGAACGGCAG CGGGTGGTCA TCGCCATCGC CATCGCCAAC GACCCCGACC TGCTGATCTG CGACGAGCCG ACCACCGCGC TGGACGTGAC CGTGCAGGCG CAGATCCTCG AGGTGCTGCG CACCGCGCGC GACGTCACCG GGGCAGGCGT GCTCATCATC ACCCACGACC TCGGCGTTGT CGCCGAGTTC GCCGACCGGG CGCTGGTGAT GTACGCCGGC CGGGCCGTCG AGATCGCCTC GGTGTCGGAG CTGTACACCG AGCGGCGGAT GCCCTACACG GTCGGGCTGC TCGGGTCGGT GCCACGGCTC GACGCGCGCC AGGGCGAGCG CCTGGTGCCG ATTCCCGGTG CACCGCCGTC GCTGGCGGCC CTGCCACCCG GCTGCCCGTT CGCACCGCGC TGCCCGCTGG CGATCGACGA GTGCCGCGCC GCCGAACCGG AGCTCATCGA GGTGGCCCCG GGTCACCTCG CGGCGTGTAT CCGCACCGAA CACGTCGCGG GCCGCAGCGC CGCCGAGGTG TACGGCGTGT CGACCGCAGC GGCCGCGTCG CCGCCGTCGG CCGACGATCC CGTGGTGCTC AAGGTGAGCG ATCTGGTGAA GACCTACACG CTGACCAAGG GCACCGTGTT CCGGCGCCGG ATCGGCGAGG TGCGCGCCGT CGACGGCATC AGCTTCGAAC TGCAGCAGGG CCGCACGCTG GGGATCGTCG GCGAATCCGG ATCCGGCAAG TCGACGACGC TGCACCAGAT CCTGGAACTC GAACCGCCGC AGGGCGGTTC GATAGAGGTG CTCGGCGAGG ACGTGGCCGC GCTCGACACG AGGGCGCGGC GTGCGCTGCG CGGTGACCTG CAGGTGGTGT TCCAGGATCC GGTGGCCTCG CTCGACCCCC GCCTACCGGT GTTCGAGGTG TTGGCAGAAC CGTTGCAGGC CAACAACTTC GACAAGGCCC GCATCGACGA GCGGGTGGCC GAACTACTCG GCATCGTCGG GCTGCGCCGT GAGGATGCCA GCCGCTACCC CGCCGAGTTC TCGGGCGGGC AGAAGCAGCG CATCGGCATC GCGCGGGCAC TGGCCACCCA GCCGAAGATC CTCGCCCTCG ACGAACCCGT CTCCGCGCTG GACGTGTCCA TCCAGGCGGG CATCATCAAC CTGCTGCTCG ACCTGCAGGA GCGGTTCGGG CTGTCGTATC TGTTCGTCTC GCACGACCTG TCGGTGGTGC GGCACCTCGC CCACCGGGTG GCCGTCATGC ACAAGGGCGC CATCGTCGAA CAGGGCGACG GGGACCGGGT CTTCACCGCG CCGCAACACG ACTACACGCG CCGCCTGTTG GCGGCGGTAC CCCAGCCGAG CGTCCCGCAA CGTTAG
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Protein sequence | MSLLEVSGLT VTFATDTERV AAVRGLDYRL DAGEVVALVG ESGAGKSAGA MAVAGLLPEH AEVAGSVRLD GTELLGLSDA EMSKIRGRRI GTVFQDPMSA LTPVYTVGDQ IAEALRVHNR DLDRRAARTR AVELLELVGI AQPERRARAF PHELSGGERQ RVVIAIAIAN DPDLLICDEP TTALDVTVQA QILEVLRTAR DVTGAGVLII THDLGVVAEF ADRALVMYAG RAVEIASVSE LYTERRMPYT VGLLGSVPRL DARQGERLVP IPGAPPSLAA LPPGCPFAPR CPLAIDECRA AEPELIEVAP GHLAACIRTE HVAGRSAAEV YGVSTAAAAS PPSADDPVVL KVSDLVKTYT LTKGTVFRRR IGEVRAVDGI SFELQQGRTL GIVGESGSGK STTLHQILEL EPPQGGSIEV LGEDVAALDT RARRALRGDL QVVFQDPVAS LDPRLPVFEV LAEPLQANNF DKARIDERVA ELLGIVGLRR EDASRYPAEF SGGQKQRIGI ARALATQPKI LALDEPVSAL DVSIQAGIIN LLLDLQERFG LSYLFVSHDL SVVRHLAHRV AVMHKGAIVE QGDGDRVFTA PQHDYTRRLL AAVPQPSVPQ R
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