Gene Mjls_3870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3870 
Symbol 
ID4879580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp4097440 
End bp4098639 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content69% 
IMG OID640141182 
Productglycosyl transferase family protein 
Protein accessionYP_001072137 
Protein GI126436446 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0269562 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGTACC GTTTCGCGGT GATGGTCGAG TACCTTGCGC TCTCCGATCG CGGCGCGGGC 
GTGCCGCTGC GCGAGCTCGT CCTCGTCGGC CTGACGGCCG CGATCATCAC CTACTTCGCC
ACCGGGTGGG TCCGTGTCCT CGCCACGCGG CTGGGTGCGG TGGCCTACCC GCGTGAGCGC
GACGTGCATG TGGAGCCCAC TCCGCGGATG GGCGGGCTGG CGATGTACGT CGGCGTCGCC
GCGGCGGTAC TGCTGGCCTC CCAACTGCCC GCGCTCACCC GCGGTTTCGT CTACTCCACC
GGTATGCCCG CGGTCGTGGT CGCCGGCGGG CTCATCATGG CGATCGGGCT GATCGACGAC
CGGTGGGGAC TCGACGCGCT CACCAAGTTC GCCGGCCAGC TCACCGCGGC CAGCGTGATG
GTCACCATGG GGGTGGCGTG GAGCGTGCTG TACATCCCCA TCGGCGGCGT CGGCACCATC
GTGCTCGACC AGGTCGCCTC GATCCTGCTG ACGCTGGCGC TCACGGTGGC GATCGTCAAC
GCGATGAACT TCGTCGACGG ACTCGACGGG CTCGCGGCCG GGCTGGGGTT GATCACGGCG
CTGGCCATCT GCCTGTTCTC CGTCGGGCTG TTGCGTGATC ACGGCGGCGA TGTGCTGTTC
TACCCGCCCG CGGTCATCTC GGTGGTGCTC GCCGGGGCCT GTCTTGGCTT TCTGCCGCAC
AACTTCCACA AGGCCAGGAT CTTCATGGGG GACTCGGGGT CGATGCTGAT CGGCCTCATG
CTGGCCGCGG CCTCGACCAC GGCGGCCGGG CCCATTTCCC AGACGGCGTA CGGCGCCCGC
GACGTGTTCG CGTTGCTGTC GCCCTTCCTG CTGGTCGTCG CCGTCATGTT CGTCCCGGCG
CTGGACATGT TGCTGGCGAT CATCCGGCGC ACCCGCGCGG GCCTCAGCCC GTTCAGCCCC
GACAAGATGC ATCTGCACCA CCGGTTGCTG GAGATCGGCC ACTCCCACCG CCGCGTGGTG
CTGCTGATCT ACATGTGGGT CGGCATCGTC GCCCTCGGTG CGGCGAGCAC CATATTCTTC
GATCCCCGGC ACACCGGAAT GGTCATGCTC GGCGCGACCG CGGTGGCCGT CGTGGTGACC
CTCGTTCCAC TGGTCCGGCG CCGAGAAGTG GCAGCGGAGA GCGTGTACGA CGAAAAGTAG
 
Protein sequence
MQYRFAVMVE YLALSDRGAG VPLRELVLVG LTAAIITYFA TGWVRVLATR LGAVAYPRER 
DVHVEPTPRM GGLAMYVGVA AAVLLASQLP ALTRGFVYST GMPAVVVAGG LIMAIGLIDD
RWGLDALTKF AGQLTAASVM VTMGVAWSVL YIPIGGVGTI VLDQVASILL TLALTVAIVN
AMNFVDGLDG LAAGLGLITA LAICLFSVGL LRDHGGDVLF YPPAVISVVL AGACLGFLPH
NFHKARIFMG DSGSMLIGLM LAAASTTAAG PISQTAYGAR DVFALLSPFL LVVAVMFVPA
LDMLLAIIRR TRAGLSPFSP DKMHLHHRLL EIGHSHRRVV LLIYMWVGIV ALGAASTIFF
DPRHTGMVML GATAVAVVVT LVPLVRRREV AAESVYDEK