| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3847 |
|---|
| Symbol | |
|---|
| ID | 4879557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 4069108 |
|---|
| End bp | 4071387 |
|---|
| Gene Length | 2280 bp |
|---|
| Protein Length | 759 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640141156 |
|---|
| Product | glycogen branching enzyme |
|---|
| Protein accession | YP_001072114 |
|---|
| Protein GI | 126436423 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
|---|
| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0235209 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGA CAAAAGGACT GCCGAAAGAC ACCGCGGTGA CCCCCAGCCC GCATCTGCGG
CCGCACACCG CCGACCTGAA CCGGTTGCTC GCCGGTGAGC ACCACGACCC GCATTCGATC
CTCGGGGCGC ACGAATACGA CGACCACACG GTGATCCGGG CGTACCGTCC GCACGCGACC
GAGGTCGCGG CCGTCGTCGG CGGCGAACGC CACGTGTTCA CCCACCTCGA GGCCGGCGTG
TTCGCGGTGA CGCTGCCGTT CACCGGCCTG ATCGACTACC GCCTCGAGGT CGGCTACGAC
CACGGCGGCG ACCAGCCGCA CATCCACCAC ACCGCCGACG CGTACCGGTT CCTGCCCACG
CTGGGCGAGA TGGACCTGCA CCTGTTCTCC GAGGGGCGCC ACGAACGGTT GTGGGAGGTG
CTCGGGGCGC ATCCGCGCAC CTTCGAAACC CCCGACGGCG TCGTCGAAGG CGTCTCGTTC
GCCGTCTGGG CGCCCAACGC CAACGGTGTG CAGCTGATCG GCGACTTCAA CCACTGGGAC
GGCAACGAGG CGCAGCTGCG CGTCCTCGGT TCGACCGGGG TGTGGGAGCT GTTCTGGCCG
GACTTCCCGG TCGACGGGCT CTACAAGTTC CGCATCCACG GCGCCGACGG CGTGGTGAGC
GAGCGGGCCG ACCCGATGGC CTTCGCGACC GAGGTGCCGC CGCAGACCGC ATCGCGGGTC
ACCACGAGCA GCTACACGTG GAACGACGAC GCGTGGATGA CGCAGCGCGC CGCCCAGAAC
CCGGTGTTCG AGCCGATGAG CACCCTCGAG GTGCACCTCA TGTCGTGGCG GCCCGGCCTG
TCGTACGTGG AGCTGGCCGA TCAGCTGACC GAGTACGTCG TCGAGCACGG GTTCACCCAT
GTCGAGATGC TGCCGGTGGC CGAGCACCCG TTCGGGGGTT CGTGGGGTTA CCAGGTCACG
TCGTACTACG CGCCGACCTC GCGCCTGGGC ACCCCCGACG AGTTCCGCTA CCTCGTCGAC
CGACTGCATC AGGCCGGCAT CGGGGTGATC GTCGACTGGG TGCCCGCGCA CTTCCCGAAG
GACGCGTGGG CGCTGGGCCG GTTCGACGGC ACCGCACTCT ACGAACACGC CGACCCCCGC
CGCGGTGAAC AGTTGGATTG GGGCACATAC GTCTTCGACT TCGGCCGGGC CGAGGTGCGC
AACTTCCTGG TCGCCAACGC GCTGTACTGG CTGCAGGAGT TCCACGTCGA CGGACTACGC
GTGGACGCCG TCGCCTCGAT GCTCTACCTG GACTACTCGC GGCCCGAGGG CGGCTGGACG
CCGAACATCT ACGGCGGCCG CGAGAACCTC GAGGCGGTGC AGTTCCTCCA GGAGATGAAC
GCCACTGTGC ACAAGGCCAG TCCGGGCATC GTGACGATCG CCGAGGAGTC GACGTCGTGG
CCCGGCGTGA CCCGTCCGAC CAATCTGGGC GGGCTGGGCT TCTCGATGAA GTGGAACATG
GGCTGGATGA ACGACACGTT GGCGTTCATC AGCCGCGACC CCATCCACCG CAGCTACCAC
CACCACGAGA TGACGTTCTC GATGCTCTAC GCGTTCAGCG AGAACTACGT GCTGCCGATC
AGCCACGACG AGGTGGTGCA CGGTAAGGGC ACGCTGTGGG GCCGGATGCC CGGCGACGAC
CACCGCAAGG CCGCGGGCGT GCGGCAGCTG CTGGCCTACC AGTGGGCGCA CCCCGGTAAG
CAGTTGCTGT TCCAGGGCCA GGAGTTCGGC CAGCGCGCGG AGTGGTCGGA GGAGCGGGGC
GTCGACTGGT ACCAACTCGA CGAGAACAGC TACTCGGGCG GCATCCTGCG GATGATCTCC
GACATGAACG GGATCTACAC CAGCCACCGG GCGCTGTGGT CACACGACAC CAGCCCGGAG
GGGTACTCGT GGATCGACGC CAACGACTCG ACGAACAACG TGCTGAGCTT CCTGCGCTAC
GGCGACGACG GTTCGGTGCT GGCGTGTGTG TTCAACTTCT CCGGCTCCGA GCACAGCCAC
TACCGGCTGG GCCTGCCGCA CGCCGGGACG TGGCGTGAGG TGCTCAACAC CGACGCGGCC
GACTACAACG GCGCGGGCAT CGGCAACTAC GGGGCGGTGC AGGCCACCGA CGAGCCGTGG
CACGGCCGGC CCGCCTCGGC GGTGATGGTG CTGCCGCCGC TGTCGGCGCT GTGGTTCGAG
CCGGTGGCCG CCGAGGCGCC CGTCGTCCAG GAGCCCCCGA CTGCGCCGCC GCTGTCCTGA
|
|---|
| Protein sequence | MAKTKGLPKD TAVTPSPHLR PHTADLNRLL AGEHHDPHSI LGAHEYDDHT VIRAYRPHAT
EVAAVVGGER HVFTHLEAGV FAVTLPFTGL IDYRLEVGYD HGGDQPHIHH TADAYRFLPT
LGEMDLHLFS EGRHERLWEV LGAHPRTFET PDGVVEGVSF AVWAPNANGV QLIGDFNHWD
GNEAQLRVLG STGVWELFWP DFPVDGLYKF RIHGADGVVS ERADPMAFAT EVPPQTASRV
TTSSYTWNDD AWMTQRAAQN PVFEPMSTLE VHLMSWRPGL SYVELADQLT EYVVEHGFTH
VEMLPVAEHP FGGSWGYQVT SYYAPTSRLG TPDEFRYLVD RLHQAGIGVI VDWVPAHFPK
DAWALGRFDG TALYEHADPR RGEQLDWGTY VFDFGRAEVR NFLVANALYW LQEFHVDGLR
VDAVASMLYL DYSRPEGGWT PNIYGGRENL EAVQFLQEMN ATVHKASPGI VTIAEESTSW
PGVTRPTNLG GLGFSMKWNM GWMNDTLAFI SRDPIHRSYH HHEMTFSMLY AFSENYVLPI
SHDEVVHGKG TLWGRMPGDD HRKAAGVRQL LAYQWAHPGK QLLFQGQEFG QRAEWSEERG
VDWYQLDENS YSGGILRMIS DMNGIYTSHR ALWSHDTSPE GYSWIDANDS TNNVLSFLRY
GDDGSVLACV FNFSGSEHSH YRLGLPHAGT WREVLNTDAA DYNGAGIGNY GAVQATDEPW
HGRPASAVMV LPPLSALWFE PVAAEAPVVQ EPPTAPPLS
|
|---|
| |