Gene Mjls_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3293 
Symbol 
ID4879005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp3451259 
End bp3453052 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content69% 
IMG OID640140594 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_001071562 
Protein GI126435871 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.236935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGAGT TCAGTGTGCC TGCACCGTTC ACGGTGGGTG AGCGCGACAC CGTCGTCAGC 
GCCGTATTCG ACCACGAGCG CGACGACCCC GACCACGTCA TCTTCCGCCG GTTGGTCGAC
GGTGACTGGA CGGACGTGAC ATGCGGCCAG GCTGCCGCCC AGATCCGTTC GGTCGCACTG
GGTTTGATCG CGTCGGGGGT ACAGCCCGGG GATCGCGTCG CGCTGCTGTC GGCGACCCGC
TACGAGTGGC CGATCATCGA CTTCGCGATC CTGGCCGTCG GCGCGCTGAC CGTCCCGATC
TACGAGACGT CGTCTGCCGA GCAGGTCCGC TGGGTGCTCT CCGACTCCGG CGCGGTGCTG
GCGATCGTCG AGAACGACGC CCACGCCGAC AGGGTCGAAC AACTGCGGGC CGACCTGCCT
GAACTGCGGA CGGTGCTGCG CATCGAGGGT TCGGGCACCG GTGCGATCGA CGCGCTGGCC
GAGGCCGGCC GGGACGTGGC GCCGGCCGAA CTCGACGACC GGCTGGCCGG CATCCGGTCC
GCCGAACCGG CCACCATGAT CTACACCTCG GGCACCACCG GCAGGCCGAA GGGCTGCCAG
CTCACCCACG CCAACCTGGT CTTCGAGATC CGCGGCGCCA AGAGCTGCTT CCCGACCCAG
CTCACCAAGG GTGAGCGGAT GCTGGTGTTC CTGCCGCTGG CCCACGTGCT GGCCCGCGCG
ATCACGATCG CCGCATTCGC CAACAAGGTC ACCCTCGGGT TCACCAGCGA CATCAAGAAC
CTCGTTCCGA CGTTCGGGGT GTTCAAGCCG ACGCTGGTGG TGTCGGTGCC GCGGGTGTTC
GAGAAGGTCT ACAACACCGC CGAACAGAAC GCCCGCAACG ACGGTAAGGG TCGCATCTTC
GACATCGCCG CGGCGACGGC GATCGAGTAC AGCCAGGCCG AGGGCGGCCC GGGGTTGCTG
CTTCGGGCCA AGCACGCGGT GTTCGACCGG CTCGTCTACG GCAAGCTTCG CGCTGCGCTC
GGCGGCGAGT GCCGCGCCGC GATCTCGGGC GGCGCGCCGC TGGGCGCCCG CCTCGGCCAC
TTCTACCGCG GCGTCGGGCT GACCATCTAC GAGGGGTACG GGCTGACCGA GACCAGTGCC
GCCATCACCG TCAACCGGGT CGACGACATC AAGATCGGTT CGGTGGGCAA GCTGTTGCCG
GGCAACAGCA TGCGGCTCGG CGACGACGAC GAGCTGCTGG TGTCCGGCGG CGTGGTGTTC
GGCGGCTACT GGCGCAACGA GGAGGAGACC GCGAAGGCCT TCACCGACGG GTGGTTCCAC
ACCGGTGACC TCGGCGCGAT CGACGACGAC GGCTTCCTCA CGATCATCGG GCGCAAGAAG
GAGATCATCG TGACCGCCGG CGGCAAGAAC GTCGCCCCGG CCGTCATGGA GGACCAGTTG
CGCGCCCATC CGCTGATCAG CCAGGCGATG GCCGTCGGTG ACGCCCGGCC GTTCGTGGGC
GCGTTGATCA CCATCGACCC CGAGGCATTC GAGGGCTGGA AACAGCGCAA CGGCAAGGAC
AGCGGTGCGT CGGTCGGCGA CCTCGCCACC GACCCCGACC TGCTCTCCGA GATCGACACC
GCGGTCAAGG AGGCCAACCA GGCGGTGTCG AAGGCCGAGG CGATCCGCAA GTTCCGCATC
CTGCCGGTGG ACTTCACCGA GGACACCGGT GAGCTCACCC CCACGCTGAA GGTCAAGCGC
GCGGTGGTCG CCGAGAAGTT CGCCGACCAC ATCGAGGCGC TCTACACCGG TTAG
 
Protein sequence
MPEFSVPAPF TVGERDTVVS AVFDHERDDP DHVIFRRLVD GDWTDVTCGQ AAAQIRSVAL 
GLIASGVQPG DRVALLSATR YEWPIIDFAI LAVGALTVPI YETSSAEQVR WVLSDSGAVL
AIVENDAHAD RVEQLRADLP ELRTVLRIEG SGTGAIDALA EAGRDVAPAE LDDRLAGIRS
AEPATMIYTS GTTGRPKGCQ LTHANLVFEI RGAKSCFPTQ LTKGERMLVF LPLAHVLARA
ITIAAFANKV TLGFTSDIKN LVPTFGVFKP TLVVSVPRVF EKVYNTAEQN ARNDGKGRIF
DIAAATAIEY SQAEGGPGLL LRAKHAVFDR LVYGKLRAAL GGECRAAISG GAPLGARLGH
FYRGVGLTIY EGYGLTETSA AITVNRVDDI KIGSVGKLLP GNSMRLGDDD ELLVSGGVVF
GGYWRNEEET AKAFTDGWFH TGDLGAIDDD GFLTIIGRKK EIIVTAGGKN VAPAVMEDQL
RAHPLISQAM AVGDARPFVG ALITIDPEAF EGWKQRNGKD SGASVGDLAT DPDLLSEIDT
AVKEANQAVS KAEAIRKFRI LPVDFTEDTG ELTPTLKVKR AVVAEKFADH IEALYTG