| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3175 |
|---|
| Symbol | |
|---|
| ID | 4878888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 3327757 |
|---|
| End bp | 3328293 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640140475 |
|---|
| Product | PBP family phospholipid-binding protein |
|---|
| Protein accession | YP_001071445 |
|---|
| Protein GI | 126435754 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1881] Phospholipid-binding protein |
|---|
| TIGRFAM ID | [TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.273283 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTTC CGTACAACCC GTATGAGTTC CTGCCACAAC TGCCGTCGTT CACGCTGACC
TCCGAGTCGG TGACCGACGG GCAGCCGCTG GCCAACGACC AGGTGAGCGG CCTGATGGGT
GCCGGCGGTT CCGACGTCTC GCCGCAGCTG TCGTGGTCAG GCTTCCCGGA GGAGACGCGC
AGCTTCGCCG TCACCGTCTA CGACCCCGAC GCCCCGACCG GATCCGGCTT CTGGCACTGG
GCGGTGTTCA ACCTGCCCGC CACCGTCACC GAACTGCCCG CCGGTGTCGG CGACGGCAGC
GCCAAGGGCT TCCCGGGTGA TGCGGTGACG CTGGCCAACG ACGCGGGCAT GAAGCGTTAC
GTCGGTGCCG CCCCGCCGCC GGGACACGGT CCGCACCGCT ACTTCATCGT GGTGCATGCC
GTCGACGTCG AGAAGCTCGA CATCCCCGAG GACGCGACCC CGGCCTATCT CGGGTTCAAC
CTGTTCAGCC ACGCGATCGC CCGCGCGATC ATCCACGGCA CCTACGAGCA GAAGTAG
|
|---|
| Protein sequence | MAFPYNPYEF LPQLPSFTLT SESVTDGQPL ANDQVSGLMG AGGSDVSPQL SWSGFPEETR
SFAVTVYDPD APTGSGFWHW AVFNLPATVT ELPAGVGDGS AKGFPGDAVT LANDAGMKRY
VGAAPPPGHG PHRYFIVVHA VDVEKLDIPE DATPAYLGFN LFSHAIARAI IHGTYEQK
|
|---|
| |