Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_3112 |
Symbol | |
ID | 4878825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 3254311 |
End bp | 3255225 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640140412 |
Product | ribosomal large subunit pseudouridine synthase D |
Protein accession | YP_001071382 |
Protein GI | 126435691 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.233987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTGC CGGAGGGGCT GGGCGGAATG CGGGTGGACG CCGGGCTGTC GCGGCTGCTG GGGCTGTCAC GCACCGCGGC GGCGGCGATC GCCGAAGACG GTCGGGTCGA CATCGACGGC GCGCCCGCGG GTAAGTCGGA CCGCCTCACG GCGGGCGCCT GGCTCGAGGT GCGGTTGCCG GAGGCGCCGC CGCCGGTGGA GAACACCCCG GTCGAGATCG AGGGTATGGC GGTGCTGTAC TCCGACGACG ACATCGTGGC CGTCGACAAA CCCCCAGGGG TGGCCGCCCA CGCGACCGTC GGATGGCACG GCCCCACCGT GCTCGGTGGT CTGGCGGCCG CCGGCTTCCG GATCAGCACC TCGGGCATCC ACGAGCGGCA GGGCATCGTG CACCGCCTCG ACGTCGGCAC CTCGGGGGTC ATGGTCGTCG CCCTGTCCGA ACGCGCCTAC ACGGTGCTCA AGCGGGCGTT CAAGCAGCGC ACCGTCGAGA AGCGGTATCA CGCGCTGGTA CAGGGCCATC CGGACCCGAG CAGCGGCACG ATCGACGCGC CGATCGGGCG GCACCGGGGC CACGACTGGA AGTTCGCCGT CACCGAGGGC GGCAGGCACA GCGTCACCCA CTACGACACG CTGGAGGCGT TCCAGGCGGC CAGCCTGCTC GACATCGAAC TGGAAACCGG CCGCACCCAC CAGATCCGGG TGCACTTCGC CGCGCTGCAC CACCCGTGCT GCGGCGATCT GACCTACGGC GCCGATCCCA CGCTGGCCCG CCGTCTCGGG CTCGAACGTC AATGGCTGCA CGCCCGTTCG CTGGCGTTCG CCCATCCGGC CGACGGTCGC CGGATCGAGA TCACCAGCCC TTATCCGGCC GATCTGCAGC ACGCCCTCGA CGTCCTGCGC CGTCACGCGC GGTGA
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Protein sequence | MPVPEGLGGM RVDAGLSRLL GLSRTAAAAI AEDGRVDIDG APAGKSDRLT AGAWLEVRLP EAPPPVENTP VEIEGMAVLY SDDDIVAVDK PPGVAAHATV GWHGPTVLGG LAAAGFRIST SGIHERQGIV HRLDVGTSGV MVVALSERAY TVLKRAFKQR TVEKRYHALV QGHPDPSSGT IDAPIGRHRG HDWKFAVTEG GRHSVTHYDT LEAFQAASLL DIELETGRTH QIRVHFAALH HPCCGDLTYG ADPTLARRLG LERQWLHARS LAFAHPADGR RIEITSPYPA DLQHALDVLR RHAR
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