Gene Mjls_2957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2957 
SymbolxerD 
ID4878670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp3081022 
End bp3081978 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content72% 
IMG OID640140252 
Productsite-specific tyrosine recombinase XerD 
Protein accessionYP_001071227 
Protein GI126435536 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02225] tyrosine recombinase XerD 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.271721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.636956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCCT CAGCTGTTCG ACGGTCGGCG CTCGACGATC AGCTGCAGGG CTACCTCGAC 
CATCTGACCA TCGAACGCGG CGTCGCCGCG AACACGCTGA GCTCTTACCG CCGCGATCTG
CGGCGCTATT CGGAGCACCT CACCGGCCGC GGGGTCGAGG ACCTCGCGAA GGTCACCGAA
TCCGATGTCA GCGACTTCCT GGTCGCCCTG CGGCGCGGTG ATCCCGACAC GGGGGCCCAG
GCGCTGTCGG CGGTCTCGGC GGCGCGGGCG CTGATCGCGG TGCGAGGTCT GCACCGCTTC
GCGACCGCCG AGGGGTTGAC CGATGTCGAC GTGGCCCGCG CGGTCAAACC GCCCACCCCC
GGGCGCCGGT TGCCCAAGAG CCTGTCGATC GACGAAGTTC TCGCACTCCT CGACGGCGCC
GGAGGTGACA GCGAGGCCGA CGGCCCCCTC ACACTGCGCA ACCGCGCACT GCTCGAACTG
CTGTACTCGA CCGGCGCGCG GATCTCCGAA GCGGTCGGCC TCGACATCGA CGACGTCGAC
ACCCATGCGC GCTCTGTGCT GCTGCGCGGT AAGGGCGGGA AGCAACGGCT GGTGCCGATC
GGCAGGCCTG CGGTGAGCGC GCTGGACGCC TACCTGGTCC GGGGGCGGCC GGATCTGGCC
CGCCGCGGCC GCGGTACGCC GGCGATCTTC CTCAACGCGC GCGGGGGCCG GCTGTCGCGC
CAGAGCGCGT GGCAGGTGCT GCAGGACGCC GCCGACCGGG CCGGGATCAC CTCCGCGGTG
TCGCCGCACA CGTTGCGGCA CTCCTTCGCG ACCCATCTGC TCGACGGCGG CGCCGATGTG
CGCGTCGTCC AGGAACTGCT CGGGCACGCC TCGGTGACCA CGACGCAGAT CTACACCATG
GTGACGGTGC ATGCGCTGCG CGAGGTGTGG GCGGGGGCGC ATCCGCGGGC CCGGTGA
 
Protein sequence
MAPSAVRRSA LDDQLQGYLD HLTIERGVAA NTLSSYRRDL RRYSEHLTGR GVEDLAKVTE 
SDVSDFLVAL RRGDPDTGAQ ALSAVSAARA LIAVRGLHRF ATAEGLTDVD VARAVKPPTP
GRRLPKSLSI DEVLALLDGA GGDSEADGPL TLRNRALLEL LYSTGARISE AVGLDIDDVD
THARSVLLRG KGGKQRLVPI GRPAVSALDA YLVRGRPDLA RRGRGTPAIF LNARGGRLSR
QSAWQVLQDA ADRAGITSAV SPHTLRHSFA THLLDGGADV RVVQELLGHA SVTTTQIYTM
VTVHALREVW AGAHPRAR