Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_2671 |
Symbol | |
ID | 4878385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 2788885 |
End bp | 2789739 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640139966 |
Product | FliA/WhiG family RNA polymerase sigma factor |
Protein accession | YP_001070942 |
Protein GI | 126435251 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCC ACGCTCACCC GGAGGCGACT TCAACACCCG GCATCGATAC GCCGTATGAC GGCAACGACG TCGATGTCGA TCGCCTTTTC GACCGTCTCG CTGAAAGCGC CGACGACAGC GAACGGCAGC GATGGCGTCG GCACATCATC ACCGCGTGCG TACCGATCGC CGACCACATC GCCTACCGAT TCGTCGGGCG TGGCGAGCCG TCGGAGGATG TGATCCAGGT AGCCCGTATC GGGTTGATCA AGACCGTCGA TCGTTACGAC CCGGACAAGG GCCATTTCCT GGCGTTCGCC GTCCCCACGA TCCGAGGAGA GATCCGACGG CACTTCCGGG ACAACACCTG GACGGTGCGG GTGCCCCGCA AAGTGCAGGA GACCCAGCTG CGCATGCGCG ACGCCGTCAA CACGCTCTCG CAGCGACTCA ACCGCACGCC CACGGGCGTC GAACTGGCCG AGGAACTCGA TGTCGGCAGC GAGGAGCTCG GGGATTGCCA AGCCGCGACC ACCGCTTATC GGCCGGTATC GCTCGACGCG CCGCTGCTCA CCGCGCAGAA CGACGGCGAC ACAGTGGGCT CGATGCAAGG AGGCGACGAT CCGGGTTACG GCAGGGTGGA AGACCTCATC CTGCTTCAGG AGGCCATCTC TGATCTCGAC CCTCGGCGAC GGGCGATCGT CGGCATGATC TTCTTCGACT GCCTCACGCA GCGCGAGGTG GCCCGTCGGC TCCATGTCTC CCAGGTGCAG ATCTCCCGCC TGCTCAACGA TGCGTTGGCA CGGATCCGTC AGCGGGTCAA TCTGGACGCC GCGGCCGCAC TGTGTGTCGT CGGTCCCTTC ATCGGCACCG TCTGA
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Protein sequence | MTVHAHPEAT STPGIDTPYD GNDVDVDRLF DRLAESADDS ERQRWRRHII TACVPIADHI AYRFVGRGEP SEDVIQVARI GLIKTVDRYD PDKGHFLAFA VPTIRGEIRR HFRDNTWTVR VPRKVQETQL RMRDAVNTLS QRLNRTPTGV ELAEELDVGS EELGDCQAAT TAYRPVSLDA PLLTAQNDGD TVGSMQGGDD PGYGRVEDLI LLQEAISDLD PRRRAIVGMI FFDCLTQREV ARRLHVSQVQ ISRLLNDALA RIRQRVNLDA AAALCVVGPF IGTV
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