| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_2570 |
|---|
| Symbol | |
|---|
| ID | 4878288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 2692472 |
|---|
| End bp | 2693767 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640139869 |
|---|
| Product | virulence factor Mce family protein |
|---|
| Protein accession | YP_001070845 |
|---|
| Protein GI | 126435154 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGATT TGGGGTTCTC TTCCGATGAT CGGCCGCCGT GTGTCGGGAA GCGGGTGACG
GCGACCGGGT TCTGTCTTGC GTTGACGCTG ACCGGGTGCT CCTTTCAGGG GGTGAACTCG
TTGCCGCTGC CCGGGGCCGA GGGGACGGGG CCGGGCGCCA CGTCCTACAC GGTCGAGATC
GCGAATGTCG CGACGCTGGA ATCGAATGCG CCGGTGCTGA TCGACGACGT CGTCGTCGGC
AGCGTCCGCA AGATGACCGT CGACGACTGG CATGCCGAAG TGCAGATCTC GGTCAAACCC
GACGTCGTGG TGCCTGCCAA CGCGGTGGCC ACGGTCGGCC AGACCAGCCT GCTCGGGTCG
ATGCACCTGG CGCTCAACCC GCCGCTGGGG GAATCGCCGG AGGGTCGACT GCAAGCCGGT
GCCACCATCC CCCTGAGTGA CTCGTCGACC TATCCGAGCA CCGAACGGAC GTTGTCGTCG
CTGTCGGTCG TCGCCAACGG CGGCGGGCTC GGACAGATCG GCGACATCAT CCACAACTTC
AACCTCGCGT TGTCCGGTCG TGAACCCGAG ATCCGCCAAC TGATCACCCG GCTCGACAAC
TTCGTCGGAG TCCTCGATGC GCAGCGTGAG AACATCATCG CGTCGATCCA GCAGTTGAAC
CGCGTTGCCG GCACGTTCGC CGGTCAGCGC GACACGATCG ACCGGGCGCT CAAAGAGATT
CCGCCGGCGT TGGACGTGCT GATCAGCGAA CGGCCCCGGC TGACGGCCGC TTTGGACAAG
CTCGGGAAAC TGGGTGACAC CGCAACCGCT CTGGTTGAGG ACGCCGGTGA TGATCTGGTC
AAGGATCTGG AGAATCTGGG GCCGGCTCTC GGGGCGCTCG CCGACATCGG ACCCGACCTC
AACCTCGCGC TGGCCTTCGC GACGGCCTTC CCCTACGGCC CTTATTACGG CGACCGGATC
ACCCGTGGTG ACTACATCAA CCTGTTCGCC ACCTTCGACA TCACCTATCC GCGCCTGAAG
AAGACACTCC TGCAGGGCAC CCGGTGGGGT GATGAGAATG CCAAACTCAT ACCGGCCCCG
GGCGACCCCT ACTTCCTGAA CTATTCGTAC AGTCCCATGT CGATCGGTGT TGCGCCGCCA
CCGGGCGCGG TGCCGCCGGG CGCGACGTTG CCGACGGTGT CCGGACCGCT GCTCCCGGTG
TCGCCACCCC CGCCGGCTGC GCCGTGGCTG CCGCAGGCAC CGGTCAGTAC CTCTTCGCAG
ATCTTCGCAG GACCCTATGG CCAGGACGCA CCGTAG
|
|---|
| Protein sequence | MVDLGFSSDD RPPCVGKRVT ATGFCLALTL TGCSFQGVNS LPLPGAEGTG PGATSYTVEI
ANVATLESNA PVLIDDVVVG SVRKMTVDDW HAEVQISVKP DVVVPANAVA TVGQTSLLGS
MHLALNPPLG ESPEGRLQAG ATIPLSDSST YPSTERTLSS LSVVANGGGL GQIGDIIHNF
NLALSGREPE IRQLITRLDN FVGVLDAQRE NIIASIQQLN RVAGTFAGQR DTIDRALKEI
PPALDVLISE RPRLTAALDK LGKLGDTATA LVEDAGDDLV KDLENLGPAL GALADIGPDL
NLALAFATAF PYGPYYGDRI TRGDYINLFA TFDITYPRLK KTLLQGTRWG DENAKLIPAP
GDPYFLNYSY SPMSIGVAPP PGAVPPGATL PTVSGPLLPV SPPPPAAPWL PQAPVSTSSQ
IFAGPYGQDA P
|
|---|
| |