Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_2342 |
Symbol | |
ID | 4878062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 2445898 |
End bp | 2447547 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640139643 |
Product | hypothetical protein |
Protein accession | YP_001070619 |
Protein GI | 126434928 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.813286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0014283 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | TTGGTTAGGC CACACACGGC GGTCGATGCC GTCGCCGAAC GCTACCTCGA CACCCTCGCC GCGCTGGATC CCTGTACCGC AACCGAACTC GGCATCGCCG GCGGCGACCG CAACTACGAC GAGGACATCA CCGACTACTC CCCCGACGCC GTCGCCGCAC GGGCCGAGGC CGCCCGTTCG GCGCTCAAGG AACTGCGCGC CGTCGTCGCG GTGGACGAGA CCGACGCGGT GACCGCCGAC GCGATGCGCG AACGACTCGG GGTGCTCATC GACATCCACG AGGCCGGACT CGACATCGGC GAACTCAACG TGATCGCCTC ACCGCTGCAG ACCATGCGGG ACGTGTTCGA CCTGATGCCC ACCGACACCG CTGACGACTG GACGGTGATC GACCGGCGAC TGGCCAAGCT GCCCGAGCGG GTGCCCGGCT ACGCCGAGGC GCTGCGCACC GCCGTGGCCG AAGGTCGTCC ACCGGCGATC AGGCAGGTGC AGCGCGGCGT CGAGCAGGCC GCCCAGATCG AGCAGTTGTT CCTCGACATG GTGTCCGGCG CCGCGGTCGC CCCCGCGCTG CGAGCCGACC TCGACCGGCA CGCCGCCGCC GCCGCGGAGG CCTACCGGGG CCTGGGCCGG GTGTTGCGCG AGGACATCGC CCCGTACGCC CGCGAGCGCG ACGCCTTCGG CCGGGACGCC TACCGGCTGA TGTCACGGTC GTTCCTCGGC ACGGAGGTCG ACCTCGACGA GACCTACGCC TGGGGTCTCG AACACCTCAA CGCGATCGTG GCCGAACAGG AGACCGTCGC CGAGCGGCTG TATCCCGGTG CGGGCGTTGC CGAGACGATC CGCCGCCTCG ACGAGGAACC GCGGTATCAG GTGCACGGCA CGGATGCGCT GCAGGCGTGG ATGCAGGATC TGTCCGACCG CGTGGTGGAC GCCCTGGCGG ACACGCATTT CGACATCGAC CCGGCGTTGC GCAACCTCGA GTGCCGGATC GCCCCCACCC ACACCGGCGG CATCTACTAC ACCGGCCCTT CGGAAGACCT CACCCGTCCC GGTCGGATGT GGTGGTCGGT GCCGCCCGGT AAGCAGACCT TCCACACCTG GCAGGAGACG ACGACGGTGT TCCACGAGGG GGTGCCCGGA CACCACCTGC AGATCGGGCG CGCCGTCGTA CTCGCCGACC GGCTGAACCG GTGGCGCCGG TTGGGCTGCT GGGTGTCCGG CCACGGTGAG GGCTGGGCGC TCTACGCCGA GCGGTTGATG GCCGAACTGG GGTGGCTCGA CGACGACGGC GCACGGATGG GCATGCTCGA CGCCCAGGGG TTCCGCGCCG CCCGGGTGGC GATCGACATC GGCGTGCATT GTGAACTCAC CGCCCCCGAC GGCGGAACGT GGGACGCCGA CCGGGCGTGG GATCTGCTGG CCGCGCACTG CGCACAGTCG GAGAAGACAC GGCGTTTCGA ACTCGACCGG TACCTCGGCT GGCCGGGGCA GGCGCCGTCC TACGCTGTCG GACAACGCAT CTGGGAGCAA CTTCGGGAAA CCATGCTGGC TCGCAGCATG ACGCTCAAGG ACTTCCACAG CCGCGCACTG GATCTCGGCG GCCTCCCGCT CGACGTGCTG CGTTCGGCGC TGGTCGGCGA ACTCGCATGA
|
Protein sequence | MVRPHTAVDA VAERYLDTLA ALDPCTATEL GIAGGDRNYD EDITDYSPDA VAARAEAARS ALKELRAVVA VDETDAVTAD AMRERLGVLI DIHEAGLDIG ELNVIASPLQ TMRDVFDLMP TDTADDWTVI DRRLAKLPER VPGYAEALRT AVAEGRPPAI RQVQRGVEQA AQIEQLFLDM VSGAAVAPAL RADLDRHAAA AAEAYRGLGR VLREDIAPYA RERDAFGRDA YRLMSRSFLG TEVDLDETYA WGLEHLNAIV AEQETVAERL YPGAGVAETI RRLDEEPRYQ VHGTDALQAW MQDLSDRVVD ALADTHFDID PALRNLECRI APTHTGGIYY TGPSEDLTRP GRMWWSVPPG KQTFHTWQET TTVFHEGVPG HHLQIGRAVV LADRLNRWRR LGCWVSGHGE GWALYAERLM AELGWLDDDG ARMGMLDAQG FRAARVAIDI GVHCELTAPD GGTWDADRAW DLLAAHCAQS EKTRRFELDR YLGWPGQAPS YAVGQRIWEQ LRETMLARSM TLKDFHSRAL DLGGLPLDVL RSALVGELA
|
| |