| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_2088 |
|---|
| Symbol | |
|---|
| ID | 4877809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 2196238 |
|---|
| End bp | 2196780 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640139386 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_001070366 |
|---|
| Protein GI | 126434675 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.162755 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCTC TTCGGTATAT TGATCCGATG GTTGAAGAAA CGTCGAATTC GGGGGTCAGG
GCGGCGCGCA CGTCGAAGGA TGTTCGGCCC GCGGACATCG ACGAGGTCGA CCGCCGAATC
CTGGCCGCTC TGCACGCCGA CGCGCGGATC TCCAACAGCG CGCTGGCCGA GTCGATCGGG
ATCGCGCCGT CGACCTGTCA CGGCCGCGTT CGGCGACTGC AGGAACTCGG CGTGATCCGC
GGCTTCTATA CCGACATCAA TCCGTCGGCC ATGGGTCTGT CGCTCCAGGC GATGATCTCG
GTGACCCTGC AGTCGAACGC GCGCGGCAAG ATTCGCAACT TCATCCAGCA CATCCGGAGC
AAGCAGCAGG TGATGGACGT GTACTTCCTC GCCGGCGCTG ACGATTTCAT CCTCCACGTC
GCAGCGCGAG ACACCGAGGA TCTGCGTGCG TTCGTCGTCG AGAACCTCAA CGCCGATGCG
GACGTGGCCG GGACGCAGAC GTCGTTGATC TTCGAGCATC TGCGGGGTGC CTCGCCACTC
TGA
|
|---|
| Protein sequence | MTALRYIDPM VEETSNSGVR AARTSKDVRP ADIDEVDRRI LAALHADARI SNSALAESIG
IAPSTCHGRV RRLQELGVIR GFYTDINPSA MGLSLQAMIS VTLQSNARGK IRNFIQHIRS
KQQVMDVYFL AGADDFILHV AARDTEDLRA FVVENLNADA DVAGTQTSLI FEHLRGASPL
|
|---|
| |