Gene Mjls_1824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1824 
Symbol 
ID4877546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp1925688 
End bp1927685 
Gene Length1998 bp 
Protein Length665 aa 
Translation table11 
GC content72% 
IMG OID640139121 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001070103 
Protein GI126434412 
COG category[P] Inorganic ion transport and metabolism
[E] Amino acid transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.807702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACTG CTGTCTCCGA AGCCGACGCG CCCGCCGCGG CGCCGCCCAC GCCGGACCCG 
GTCGCCACCG TCGGTGACCT GGCTGTGAAG TTCCGCCGCA ACGGCCGCGC GATCCACGCC
CTGCGCGGGG TGTCGCTGGC CGTCGCGCCC GGCGAGATCC TCGGCCTCGT CGGCGAATCC
GGTTCCGGGA AAAGCGTTCT CGGCTTCAGC CTGCTGGGCC TGCTACCCGA CAACGCGACC
GTCTCCGGCA CGGTCCGCGT CGCCGGCTCC GACATGGTCC GCGGAGATCC CAAGGCGCTG
CGCAAGGTGC GCCGCCTCGA TCTGGGTGCG GTGTTCCAGG ACCCGATGAC ATCGCTGAAC
CCGACCATGC GCATCGGCAG ACAGGTCGCC GAGGCCGCGG GCAGCGACGA GGAGGCTTTG
CGGCTGCTGA CCGCCGTCGG CATCCCCGAA CCCGCCCGGC GGATGCGGGC ATACCCGCAC
GAACTGTCCG GCGGGCTACG GCAACGAGTG ATGATCGCGA TCGCGATCGC CGGCGACCCG
GATCTGATCG TCGCCGACGA ACCGACCACC GCCCTCGACG TCACCGTGCA GGCGCAGGTG
TTGCGTCTGC TGCGGCGGCT GCGTGACGAG ATCGGCTGCA GCATCGTGCT GATCACCCAC
GACCTCGGGG TGGCGGCCCA GATCTCCGAC CGGATCGCGG TGCTCTACGC CGGGCGCATC
GCCGAGATCG GCCCCAGCGC CGAGGTTCTC GCCGCCCCGG CCCACCCCTA TACCCACGGA
CTGCTGCGCT CGCGTCTGAC GCTGGACACC GCGCGGGACC GGCCCCTGGC CGCGCTCGCC
GGATCGGTGC CCAGCCCGGT GACCCCACTT CCCGGGTGCG CGTTCGTCCC CCGGTGCGCG
CTGGCCACCG ACGAATGCAC CACGGCTCCG CCGGAGCCGC TCGCGGTGGC GCCCGGTCGG
GTCAGCGCGT GCATCCGCCC GCAGGGTGAG GTCGCCGAGC ACCTGGGCGC CGCGGAGACC
AACACCGACG ACGCGTTCCC GGCGACCACC GCGGACCGGG CGGAGATGCC GCCGTCGGTG
GTCCTGCGCG ACGTCACGAA GTCCTTCTCG GTCGCGCGCC GATGGTTCGA CCGGTCGGCC
GATGGCGACG GGAAGCTCCA TGCCCTGCGC GGCGTCTCGC TCCGGGTCGG ACACGGGGAA
TCGGTCGCGC TGGTCGGTGA GAGCGGTTCG GGCAAGTCGA CACTGCTGCG TGTCATCGCG
GGCCTGGAGC CGCCGACGTC CGGATTCGTC GACCTCGCGG GAGGCCAACG GCCGCAGATG
GTGTTCCAGG ATGCGGGTGC GTCGCTCACC CCGTGGCTGT CGGTCGGTGA GCTCATCGCC
GAACGGCTGC GCGGCACGGG TCTGTCGCGG GCACGGCGCC GGGAGCGGGT CGCCGAGGTG
CTGGAGCGGG TGGGGCTGCC CGCCGAGGTC GCGAAGTCGC GCGCGGGTCA ACTCTCCGGT
GGTCAGCGCC AACGGGTTTC ACTCGCCCGC GCGACGGTGG TGCCGCCCTC GGTGCTGCTG
TGCGACGAGC CGACCAGCGC GCTCGACGTC TCGCTGGCCG CCTCGGTGCT CAACCTGATC
GGAGACCTGC GCCGCAGCCT CGACATGTCC GTGGTGTTCG TGACCCACGA CCTTTCCGTG
GCGCGGGTGG TCGCCGACCG GATCGCGGTG ATGTACCTCG GGCGCATCGT CGAGATCGGA
CCGGCCGACC AGGTGATCGC CGAACCCGCG CATCCCTACA CCCAGGCCCT CGTCGACTCC
ATCCCGGACC TGGGCCGCGA ACCGCGTTCT CTCGCCGGTG AACCCGCGAG CCCCCTCTCG
CCGCCCACGG GGTGCGCGTT TCATCCGCGG TGCCCGCTCG CGATCGACGC CTGCGACGAC
ACCGGACTCG ACGTCCGCCT CGAAGGGTTC CCCGGCAACC CGCACCAGGT CGCCTGCATC
GAGCGGAAGG CGGGCTGA
 
Protein sequence
MGTAVSEADA PAAAPPTPDP VATVGDLAVK FRRNGRAIHA LRGVSLAVAP GEILGLVGES 
GSGKSVLGFS LLGLLPDNAT VSGTVRVAGS DMVRGDPKAL RKVRRLDLGA VFQDPMTSLN
PTMRIGRQVA EAAGSDEEAL RLLTAVGIPE PARRMRAYPH ELSGGLRQRV MIAIAIAGDP
DLIVADEPTT ALDVTVQAQV LRLLRRLRDE IGCSIVLITH DLGVAAQISD RIAVLYAGRI
AEIGPSAEVL AAPAHPYTHG LLRSRLTLDT ARDRPLAALA GSVPSPVTPL PGCAFVPRCA
LATDECTTAP PEPLAVAPGR VSACIRPQGE VAEHLGAAET NTDDAFPATT ADRAEMPPSV
VLRDVTKSFS VARRWFDRSA DGDGKLHALR GVSLRVGHGE SVALVGESGS GKSTLLRVIA
GLEPPTSGFV DLAGGQRPQM VFQDAGASLT PWLSVGELIA ERLRGTGLSR ARRRERVAEV
LERVGLPAEV AKSRAGQLSG GQRQRVSLAR ATVVPPSVLL CDEPTSALDV SLAASVLNLI
GDLRRSLDMS VVFVTHDLSV ARVVADRIAV MYLGRIVEIG PADQVIAEPA HPYTQALVDS
IPDLGREPRS LAGEPASPLS PPTGCAFHPR CPLAIDACDD TGLDVRLEGF PGNPHQVACI
ERKAG