Gene Mjls_1686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1686 
Symbol 
ID4877410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp1782879 
End bp1783652 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content69% 
IMG OID640138984 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001069967 
Protein GI126434276 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGGG AACATGGGCG CCTCCACGGC AAGTCCGCGG TGATCACCGG GGCGGCGTTC 
GGCATCGGCC GGGCCACCGC CGTGCTCTTC GCACGAGAGG GCGCGCGGCT GGTCGTGACC
GATATTCAGA GCGAGCCGCT GCTGGCGCTT GCCGATGAAC TGCGGCACGC CGGAGCGGAC
GTCGAGCCCG TCGTCGGCGA CGTCTCGGTG GAGTATGACG CGGGGCGGAT GATCGGGGCG
GCGGTCGACC GCTTCGGACG GCTCGATGTG CTGGTCGCCA ACGCAGGCAT CATCCCGCTC
GGCGACGCGC TGGAAATGAC CGCCGCCGGC TGGGACGAAG TGATGGCCAT CGACGGGCGC
GGCATGTTCC TGTGCTGCAA ATTCGCGATC GAGGCGATGT TGCCGACCGG GGGTGGCGCC
ATCGTCTGCC TCTCCTCGAT CTCCGGACTG GCGGGGCAGA AGCGGCAGGC GGCCTACGGT
CCCGCCAAGT TCATCGCCAC CGGCTTGACC AAGCACCTGG CAGTCGAGTG GGCCGACCGG
GGTATCAGAG TCAACGCCGT CGCCCCCGGG ACGATTCGAA CCGAGCGGGT CAAGCGGTTC
CCGGAGGAGC CGGGTGGCTC GGAGTACCTG GCGGCGGTCG AGCGTATGCA CCCGATGGGC
CGCATCGGCG AACCAGCCGA AGTCGCCAGC GCCATCGTCT TTCTCGCCTC CGACGACGCC
TCCTTCATCA CCGGCGCCGT GCTGCCGGTC GACGGGGGAT ATCTAGCGCA GTAG
 
Protein sequence
MTREHGRLHG KSAVITGAAF GIGRATAVLF AREGARLVVT DIQSEPLLAL ADELRHAGAD 
VEPVVGDVSV EYDAGRMIGA AVDRFGRLDV LVANAGIIPL GDALEMTAAG WDEVMAIDGR
GMFLCCKFAI EAMLPTGGGA IVCLSSISGL AGQKRQAAYG PAKFIATGLT KHLAVEWADR
GIRVNAVAPG TIRTERVKRF PEEPGGSEYL AAVERMHPMG RIGEPAEVAS AIVFLASDDA
SFITGAVLPV DGGYLAQ