Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_1457 |
Symbol | |
ID | 4877192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 1555599 |
End bp | 1558754 |
Gene Length | 3156 bp |
Protein Length | 1051 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640138764 |
Product | UvrD/REP helicase |
Protein accession | YP_001069749 |
Protein GI | 126434058 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0431152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAC CGGACGTCGA AGCGACCACC GCCGCGCACA CCGACCCGCG CTCGCTGCTC GAGCCGGGGC AGCGCGGCGT GGTGCGCCTG TTCGGCGGTC CCGGGACCGG GAAGTCGACG CTGCTCGTCG ACACCGCGGC TGCGCACATC GCCGCCGGCG TCGATCCGGA ATCGGTTCTG CTCCTGACCG GTTCGGCCTC GCTCCGGTCG GCGGCCCGCG CGGCGGTCAC CCGCAGACTG CTCGACGGCG GCGCCCGCCA GGTGGTGCGC GCACCACTGG TACGCACGGT CCACTCCTAT GCGTTCGCGG TGCTGCGGCT GGCCGCCCAG CGCAACGGCG ACGCCCCGCC GCGGCTGATC ACCAGCGCCG AACAGGACGG GATCATCCGC GAACTGCTCG CAGGCGACCT CGAGGACGGT GACCGTTCGG CCGTCGCCTG GCCGGCCGCA CTGCGCCCGG CACTCACCAC CGCCGGATTC GCCACCGAAC TGCGCGACCT GATGGCCCGG TGCACCGAAC GCGGTGTCGA TCCTGTTGCG CTGCAACGTC TCGGCCGGTT GTCCCGCCGC CCGGAATGGG CTGCCGCCGG CCGGTTCGCG CAGGCGTACG AGCAGATCAT GCTGCTGCGC TCGGCGGTCG GCATGGCCGC TCCCCAGGCG ACGACGCCCG CACTCGGGGC GGCCGAACTC GTCGGCGCCG CACTCGAGGC GTTCGCCATG GACGCCGATC TGCTGGCGGC CGAACGCAGC CGCATCGGAC TGCTCCTGGT CGACGACGCC CAGCACCTCG ACCCGCAGGC CGCCCGGCTG GTGCGGGTAC TGGCCGCCGG TGCCGATCTG TCCGTATTCG CCGGTGACCC CGACCAATCG GTGTTCGGCT TCCGCGGCGC GGACCCGGCG CTGCTGCACA TGGAGGAGGG CAGCGCGGTC GTCCTGACCC GCTCGCACCG TTGCGCATCC GCGGTGGCGC GTGCGATCTC CGGTATCGCG CGGCGCCTGC CCGGGCAGCG GCAGGAGTTC GTCGGCTCCG AGGACGGCGG CGGTGACGGC TCGGTCGCGG TACGGGTCGC CGCGACGGCC CATGCCGAAT CAGCCCTCAT CGCCGATGCG CTTCGCCGCG CGCACCTCGT CGACGGGGTG GCGTGGTCCG AGATGGCCGT CATCGTGCGC TCACTGCCGC GTGCCGGGGC GCCGCTGGCC CGTGCGCTCA CCGCCGCCGG GGTTCCCGTC GACCTGCCCG CGGCCGCACC GCTGGTCGAG GAGCCGGCCG CGCGCGCCCT GCTGACAGTG CTCGAGGCCA CCGCCGACGG TTTGACAGGG GCCCAGGCCG AGGCGCTGCT CTCCGGCCCG GTCGGCCGGG TCGATCCGGT CACGATGCGC CAGGTGCGCC GGGCGCTGCG CCGCGCCGAC GGTAGTCAGC CCCCGCGCGA GTTCACCGAC CTGCTCGTCG AGGCGCTCAC CGGCCCCTTG CCGGCGGCGT CGGACGTGTC GGCCGAACTG CAGCGGCCGC TGCGCCGCGT CCGCTCCGTG CTCGCGGCCG CGCGTCGCAG CGTCGACGAC GGACTCGACC CACGGCACAC CCTCTGGCAG GCCTGGCACC GCAGCGGGCT GCAGCGGCGG TGGCTCGCGG CCAGTGAACG CGGCGGGGCC GCGGGCGCCC GGGCCGATCG CGACCTCGAC GCCGTCACCG CCCTGTTCGA CGTCGCCGAT CAGTACGTGA CCCGCACCGC GGGGGCGTCG GTCCGCGGTC TCCTCGACCA TGTCGCCGCG CTCGGCCTGC CGCCTGGCCG CCGCGGTGAG CGGCGCGACC CGGAGGCCGT CGCGGTGCTC AGCGCCCATG CCGCGTTGGC GGGCGAATGG GACTTCGTCG TGATCGCCGG GCTGCAGGAA GGTCTGTGGC CGAACACGAT TCCGCGCGGT GGGGTCCTGG GCACCCAACG CCTGGTCGAC GTGCTCGACG GCGTGACCGA TTCCGCGTCC GACGCGGTGT CGACGCGCGC ACCGCTGCTC GCCGAGGAAC GCCGGCTGCT GATCGCCGCG TTCGGCCGCG CGCGGCGCCG GGTCCTGGTG ACCGCCGTCG ACAGCGATTC GGGCGCCGAA GCGCTGTTGC CGTCGCCGTT CTGCCAGGAA CTGACCGCAC TGGCCACCGA TCCGGACGAC GGTCCGCCCG CCCCCCTGCG GGCGCCGCGC GTGCTGGCGC CGTCGGCGCT GGTCGGCCGG CTGCGGGCGG TGGTGTGCGC CCCCGACGGC GCCGTCGACG ACGCGGCCCG CGAGTGCGCG GCCGCCCAGC TGGCGCGACT GGCCGCGGCG GGCGTCCCCG GCGCCGACCC CGGTCAGTGG CACGCCATGA CGACGCTGTC CACCGACGAG CCGTTGTGGA ACGACGAGCA GCAGGTGGTC ACGCTGTCGC CGTCGACGCT GCAGGCCCTG ACCGACTGCC CGCTGCGCTG GCTGCTCGAA CGCCACGGTG GGCGTGACGG TCGTGACGTC CGTTCGGCGG TCGGATCGCT GCTGCACGCG CTGGTCTCCG AACCGGGCAG GACTGAGAGC CAGCTGCTCA ACGACCTCGA GCGGGTGTGG GCGGACCTGC CGTACGAGGC GCAGTGGCAC GCCGACAACG AACTCACCCG CCATCAGGCC ATGCTGTCGG CGTTCGAGCA GTGGCGCGCC CAGACCCGCC GCGAGCTGAC CGAGGTCGGC ACCGAGATCG ACGTCGACGG TGTCGTCTGC GACGCCGACG ACGGCAGGCC CGCGGTCCGG GTGCGCGGCC GCCTCGACCG GCTGGAGCGC GACAGCGCCG GCCGGCTCGT CGTCGTGGAC ATCAAGACCG GTAAGAGCCC GGTCACCAAG GACGACGCCC AGCGGCACGC CCAGCTGGCG ATGTACCAAC TGGCCGTCGC GGCGGGCCTG CTCGCCGAGG GTGACGTGCC CGGCGGCGGC AAACTGGTCT ACCTGGGCAA GAGCGGTGCG GCCGGGCCGA CGGAACGCGA ACAGGACGCG CTGACCCCCG ACACCGTCGC GCAGTGGCGG CAGGACGTCG GCGAGGCCGC CGCCGCCACC CAGGGACCGG GGTTCGTCGC ACGGGTCAAC GACAGCTGCG CGCACTGTCC GGTGCGCAGC AGCTGCCCCG CCCAGTCCGC GGGGGAGCGC GCATGA
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Protein sequence | MTAPDVEATT AAHTDPRSLL EPGQRGVVRL FGGPGTGKST LLVDTAAAHI AAGVDPESVL LLTGSASLRS AARAAVTRRL LDGGARQVVR APLVRTVHSY AFAVLRLAAQ RNGDAPPRLI TSAEQDGIIR ELLAGDLEDG DRSAVAWPAA LRPALTTAGF ATELRDLMAR CTERGVDPVA LQRLGRLSRR PEWAAAGRFA QAYEQIMLLR SAVGMAAPQA TTPALGAAEL VGAALEAFAM DADLLAAERS RIGLLLVDDA QHLDPQAARL VRVLAAGADL SVFAGDPDQS VFGFRGADPA LLHMEEGSAV VLTRSHRCAS AVARAISGIA RRLPGQRQEF VGSEDGGGDG SVAVRVAATA HAESALIADA LRRAHLVDGV AWSEMAVIVR SLPRAGAPLA RALTAAGVPV DLPAAAPLVE EPAARALLTV LEATADGLTG AQAEALLSGP VGRVDPVTMR QVRRALRRAD GSQPPREFTD LLVEALTGPL PAASDVSAEL QRPLRRVRSV LAAARRSVDD GLDPRHTLWQ AWHRSGLQRR WLAASERGGA AGARADRDLD AVTALFDVAD QYVTRTAGAS VRGLLDHVAA LGLPPGRRGE RRDPEAVAVL SAHAALAGEW DFVVIAGLQE GLWPNTIPRG GVLGTQRLVD VLDGVTDSAS DAVSTRAPLL AEERRLLIAA FGRARRRVLV TAVDSDSGAE ALLPSPFCQE LTALATDPDD GPPAPLRAPR VLAPSALVGR LRAVVCAPDG AVDDAARECA AAQLARLAAA GVPGADPGQW HAMTTLSTDE PLWNDEQQVV TLSPSTLQAL TDCPLRWLLE RHGGRDGRDV RSAVGSLLHA LVSEPGRTES QLLNDLERVW ADLPYEAQWH ADNELTRHQA MLSAFEQWRA QTRRELTEVG TEIDVDGVVC DADDGRPAVR VRGRLDRLER DSAGRLVVVD IKTGKSPVTK DDAQRHAQLA MYQLAVAAGL LAEGDVPGGG KLVYLGKSGA AGPTEREQDA LTPDTVAQWR QDVGEAAAAT QGPGFVARVN DSCAHCPVRS SCPAQSAGER A
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