| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1390 |
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| Symbol | |
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| ID | 4877126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | + |
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| Start bp | 1489913 |
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| End bp | 1491661 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640138698 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_001069683 |
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| Protein GI | 126433992 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.211195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTCA GCTCAGAGAA GGACAACGAG AAACACCGCC GACGCCGCGT CGACGCGATC
AGGTCGCCGA CCGATGAGGC GATCCCGCAT CCCATCCTCG ACATCCCGGT CGACGAGGAG
GCCTACACCG GCTACCGGGG TCTCGACTGG GTGGTCTTCG GCGTCACCGC CGTCATCGCG
GTGGCATTCC TGGCCTGGGG GTTCGTCAGC ACCGAGTCGC TGGCCACGGC GTCGGGGAAC
GCCCTGACCT GGGTGATGGA CAACACCGGG TGGCTGTTCG TGCTCGCCGC GTCGGGATTC
GTGGTCTTCG TGCTGTGGCT GGCGCTCGGT CGCTACGGCA ACATCCCGCT CGGCCGTGAC
GACGAGGAAC CCGAGTTCCG CAGCGTCTCG TGGGTCGCGA TGATGTTCAG CGCAGGCATG
GGCATCGGGC TGATGTTCTT CGGTGTGGCC GAGCCGCTGA CCCACTTCGC CACCCCGCCA
CCGGGCGTCG TGCCACAGGG CGGTGCAGAG ACCGGTGCCG AGGCCGTCGA GTCAGCGATG
GCCACCACGC TGTTCCACTG GACCCTCCAT CCGTGGGCGA TCTACGCCGT CGTCGGGCTG
GCCATCGCCT ACGGCGTCTA CCGCAAGGGC CGGCTGCAAC TGATCAGCGC GGCGTTCGAA
CCCCTGATCG GATCCCGGGC CAACGGGCCG TGGGGCAAGG TGATCGACAT GCTGGCGATC
TTCGCCACCC TGTTCGGGTC GGCGGCCTCG CTGGGCTTGG GCGCGTTGCA GATCCGCAGC
GGCCTGCAGA TCGTCGGCGG CATCGGCGAG ACCGGCAACA CCGTCCTCAT CGTCATCATC
ACCGCCCTGA CGGTCGCGTT CGTGCTGTCG GCCGTCTCCG GGGTGGCGCG GGGCATTCAG
TGGCTGTCGA ACATCAACAT GGTGCTCGCG CTGCTGCTGG CGTTGTTCAT CTTCGTCGTC
GGCCCGACGG TGTTCATCCT CAACCTGTTG CCGACCTCGA TGGGCAGCTA CCTCGCCGAC
CTGGCGATGA TGTCGGCCCG CACCGGTGCC GAGGGTCCCG ACGTCGACAC CTGGCTGCAG
TCGTGGACGA TCTTCTACTG GGCCTGGTGG ATCTCGTGGA CCCCGTTCGT CGGCATGTTC
ATCGCCCGCA TCTCGCGCGG ACGCACCATC CGGCAGTTCG TCACCGGTGT GCTGCTGGTG
CCGAGCCTGG TGTCGCTGGT GTGGTTCTGC ATCCTCGGCG GCGCGGCCAT CGACACCCAG
CAGGGCGGGG TGGATTTGGC CGGCGAGGGC AGCAACGAGG AGCAGTTGTT CACCCTGCTC
GGTCAGTATC CGATCGCGAC CGTGGCCAGC ATCGTGGTGA TGGTGCTGGT GGCGATCTTC
TTCGTCTCCG GCGCCGATGC CGCGTCGATC GTCATGGGTT CGCTGTCCGA GCGCGGCACG
ATCAAACCCA CCCGGGGTGT GGTGATCTTC TGGGGCGTCA CGACGGGCGC GGTGGCGGCG
GTGATGCTGC TGGTCGGCGG CGCGGACGCG CTGACCGGTC TGCAGACCAT CACGATCATC
GCCGCGCTGC CCTTCGTCCT CGTCATGGTG GGGCTGGCGG TGGCGCTGGT CAAAGACCTG
CGCAACGATC CGCTGGTGGT GCGGAAGAAG TACGCCGCGG AGGCGGTGGA CAGTGCGGTC
ATCCACGGCG TCATCGAACA CGGCGACGAC TTCATCATCT CGGTGGAGAA GGATCCCGAC
GCCAGGTAG
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| Protein sequence | MTVSSEKDNE KHRRRRVDAI RSPTDEAIPH PILDIPVDEE AYTGYRGLDW VVFGVTAVIA
VAFLAWGFVS TESLATASGN ALTWVMDNTG WLFVLAASGF VVFVLWLALG RYGNIPLGRD
DEEPEFRSVS WVAMMFSAGM GIGLMFFGVA EPLTHFATPP PGVVPQGGAE TGAEAVESAM
ATTLFHWTLH PWAIYAVVGL AIAYGVYRKG RLQLISAAFE PLIGSRANGP WGKVIDMLAI
FATLFGSAAS LGLGALQIRS GLQIVGGIGE TGNTVLIVII TALTVAFVLS AVSGVARGIQ
WLSNINMVLA LLLALFIFVV GPTVFILNLL PTSMGSYLAD LAMMSARTGA EGPDVDTWLQ
SWTIFYWAWW ISWTPFVGMF IARISRGRTI RQFVTGVLLV PSLVSLVWFC ILGGAAIDTQ
QGGVDLAGEG SNEEQLFTLL GQYPIATVAS IVVMVLVAIF FVSGADAASI VMGSLSERGT
IKPTRGVVIF WGVTTGAVAA VMLLVGGADA LTGLQTITII AALPFVLVMV GLAVALVKDL
RNDPLVVRKK YAAEAVDSAV IHGVIEHGDD FIISVEKDPD AR
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