Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_1254 |
Symbol | sdhA |
ID | 4876990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 1331718 |
End bp | 1333472 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640138562 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_001069547 |
Protein GI | 126433856 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGATTG AACATCGCTA CGACGTCGTC ATCGTCGGGG CCGGCGGCGC GGGTATGCGC GCCGCGGTCG AGGCAGGTCC GCGCGCCCGC ACCGCGGTGC TGACCAAGCT GTACCCGACC CGCAGCCACA CCGGCGCCGC CCAGGGCGGC ATGTGCGCCG CGCTGGCCAA CGTCGAAGAG GACAACTGGG AGTGGCACAC CTTCGACACC GTCAAGGGCG GCGACTACCT CGCCGACCAG GACGCCGTCG AGATCATGTG CAAGGAAGCC ATCGACGCGG TGCTCGACCT CGAGAAGATG GGGATGCCTT TCAACCGCAC CCCTGAGGGC CGCATCGACC AGCGCCGGTT CGGCGGGCAC ACCCGTGACC ACGGAAAGGC CCCGGTGCGC CGGGCGTGTT ACGCCGCCGA CCGCACCGGC CACATGATCC TGCAGACGCT GTACCAAAAC TGCGTCAAAC ACGACGTCGA GTTCTTCAAC GAGTTCTACG CCCTCGACAT CACGCTGACC GAGACCCCCG GCGGCCCGGT GGCCACCGGC GTGATCGCCT ACGAGTTGGC GACCGGCGAC ATCCACGTCT TCCACGCCAA GGCGATCGTG TTCGCCACCG GCGGTTCGGG CCGGATGTAC AAGACGACGT CCAACGCGCA CACGCTGACC GGTGACGGGC TGGGCATCGT CTTCCGCAAG GGTCTGCCGC TGGAGGACAT GGAGTTCCAC CAGTTCCACC CGACGGGTCT GGCCGGCCTC GGCATCCTCA TCTCCGAGGC CGTGCGCGGT GAGGGCGGTC GCCTGCTCAA CGGCGACGGC GAGCGGTTCA TGGAGCGCTA CGCGCCGACC ATCGTCGACC TCGCCCCGCG TGACATCGTC GCCCGCTCGA TGGTCCTCGA GGTGCTCGAG GGCCGCGGCG CCGGGCCGAA CAAGGACTAC GTCTACATCG ACGTGCGCCA CCTCGGCGAG GACGTCCTCG AGGCGAAGCT GCCCGACATC ACCGAGTTCG CCCGCACCTA CCTCGGTGTC GACCCGGTCA AGGAACTGGT ACCGGTCTAC CCGACATGCC ACTACGTCAT GGGCGGCATC CCGACCACCG TGCACGGTCA GGTGCTGCGC GACAACACCA CGATCGTGCC GGGTCTCTAC GCCGCCGGCG AGTGCGCCTG CGTGTCGGTG CACGGCGCCA ACCGGCTGGG CACCAACTCG CTGCTCGACA TCAACGTGTT CGGCCGCCGC GCCGGGATCG CCGCCGCCAA CTACGCGCTC GGCCACGACT TCGTCGACCT GCCCGAGCGG CCCGCCGAGA TGGTGGTCAA CTGGGTCGGC GACATCCTCT CCGAGCACGG CAACGAGCGC GTCGCCGACA TCCGCGGGGC GCTGCAGCAG TCGATGGACA ACAACGCCGC GGTGTTCCGC ACCGAGGAGA CCCTCAAGCA GGCCCTGACC GACATCCACG CGCTCAAGGA GCGCTACTCG CGAATCACGG TGCAGGACAA GGGCAAACGC TACAACAGCG ACCTGCTCGA GGCGATCGAA CTCGGCTTCC TTCTCGAACT GGCCGAGGTC ACCGTCGTCG GTGCACTCAA CCGCAAGGAG TCCCGCGGCG GCCACGCGCG CGAGGACTAC CCGAACCGCG ACGACACCAA CTACATGCGC CACACCATGG CCTACAAGGA GGGCACCGAC CTGCTCTCCG ACGTGCGCCT GGACTACAAG CCCGTGGTGC AGACCCGCTA CGAGCCGATG GAGCGGAAGT ACTGA
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Protein sequence | MLIEHRYDVV IVGAGGAGMR AAVEAGPRAR TAVLTKLYPT RSHTGAAQGG MCAALANVEE DNWEWHTFDT VKGGDYLADQ DAVEIMCKEA IDAVLDLEKM GMPFNRTPEG RIDQRRFGGH TRDHGKAPVR RACYAADRTG HMILQTLYQN CVKHDVEFFN EFYALDITLT ETPGGPVATG VIAYELATGD IHVFHAKAIV FATGGSGRMY KTTSNAHTLT GDGLGIVFRK GLPLEDMEFH QFHPTGLAGL GILISEAVRG EGGRLLNGDG ERFMERYAPT IVDLAPRDIV ARSMVLEVLE GRGAGPNKDY VYIDVRHLGE DVLEAKLPDI TEFARTYLGV DPVKELVPVY PTCHYVMGGI PTTVHGQVLR DNTTIVPGLY AAGECACVSV HGANRLGTNS LLDINVFGRR AGIAAANYAL GHDFVDLPER PAEMVVNWVG DILSEHGNER VADIRGALQQ SMDNNAAVFR TEETLKQALT DIHALKERYS RITVQDKGKR YNSDLLEAIE LGFLLELAEV TVVGALNRKE SRGGHAREDY PNRDDTNYMR HTMAYKEGTD LLSDVRLDYK PVVQTRYEPM ERKY
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