Gene Mjls_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1243 
Symbol 
ID4876979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp1320262 
End bp1321494 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content73% 
IMG OID640138551 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_001069536 
Protein GI126433845 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.50145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.78177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCT CACGGAATCT CTCGACGCGC GTCGCGGCGC TGGCCGCGGC GGTGTCGGTG 
CTGATCGCGC CCGCACTGAT CGCGGCGCCG GGGGCCGCGG CGCAGCCCGC ACCCCAGTCC
ACGACCTGCC CGTACCGCGT GACCACGCCG CCGGCCGTCG ACGCCTCCGA AGTGCCCAAG
CCCGGACAGG ATCCGCCCGT CGCGCTGCCG GTGCCCGCCA CCCCGCTCGG CGGTGACGCG
CTGTCCGGAT GCGGCATCAT CACCGCACCG GGCGCCCCGC CCGCGCCCGC CGACGTGTCC
GCCGAGGCGT GGCTGGTCGC CGACATGGAC ACCGGTGAGG TGATCGCCGC GCGCGACCCA
CACGGCCGGC ACCGCCCGGC CAGCGTGATC AAGGTGCTGA TCGCGATCCA GTCGCTCAAG
GAGCTCAACC TCGCCAAGGC CGTGCCGGGC ACCCCCGAGG ACGGCGCCGC CGAGGGCACC
AGCGTCGGCG TCGACGTCGG CGGCCTCTAC ACGGTCAACG ATCTGCTGCA CGGGCTGCTG
ATGTACTCCG GCAACGACGC CGCCCACGCC CTGGCGCGGC AACTCGGCGG TATGGACACC
GCGCTGCTCA AGCTCAACCA GCTGGCCGGA AAGCTCGGCG GCCGCGACAC CCGGGTGGCC
ACCCCGTCGG GCCTCGACGG GCCGGGCATG AGCACGTCGG CCTACGACGT CGCGCTGTTC
TACCGGTACG CCTGGCGCAA CCCGACTTTC ACCGAGATCG TCGCCACGCG CACCTACGAC
TTCCCGGGCC GGGACGGCAA CCCGCCCTAC CCGATCGAGA ACGACGTCAA GCTGCTCTAC
AACTATCCGG GCGCGCTCGG CGGTAAGACC GGCTTCACCG ACGACGCCGG ACAGACCTTC
GTCGGCGGCG CCGAGCGCGA CGGCCGCCGC CTGGTGGCGG TGCTGCTGCG CGGCACCCGG
CAGCCGATCG CCCCGTGGGA GCAGGCCGCC CGGCTGCTCG ACTACGGCTT CGGCCTGCCG
CAGGGCACCA AGGTGGGATC GCTGATCGAA CCGGATCCGT CGCTGGACCC GAGTCCGCAG
ACCGCCGAGA CCGAGGCGGC CGCGCAGGCG GCTGCGGTGC TGCCCGCCGC CGACGCCATG
CCCGTGCGGG TCGGGGTGGG CGTGATCGGC AGCATCGTCG TGTTCGCGTT GATGATGGCG
GCCCGCTCGC TCAACCGGCG TCCGCAGAAC TGA
 
Protein sequence
MAASRNLSTR VAALAAAVSV LIAPALIAAP GAAAQPAPQS TTCPYRVTTP PAVDASEVPK 
PGQDPPVALP VPATPLGGDA LSGCGIITAP GAPPAPADVS AEAWLVADMD TGEVIAARDP
HGRHRPASVI KVLIAIQSLK ELNLAKAVPG TPEDGAAEGT SVGVDVGGLY TVNDLLHGLL
MYSGNDAAHA LARQLGGMDT ALLKLNQLAG KLGGRDTRVA TPSGLDGPGM STSAYDVALF
YRYAWRNPTF TEIVATRTYD FPGRDGNPPY PIENDVKLLY NYPGALGGKT GFTDDAGQTF
VGGAERDGRR LVAVLLRGTR QPIAPWEQAA RLLDYGFGLP QGTKVGSLIE PDPSLDPSPQ
TAETEAAAQA AAVLPAADAM PVRVGVGVIG SIVVFALMMA ARSLNRRPQN