Gene Mjls_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1242 
Symbol 
ID4876978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp1319397 
End bp1320284 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content76% 
IMG OID640138550 
Product2-nitropropane dioxygenase, NPD 
Protein accessionYP_001069535 
Protein GI126433844 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.488111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGT CGACGCCGTG GTGCCGGGCG ATGGGCTGTG AGGTGCCCAT CGTCAACGCC 
CCGATGGGCG GGGCCGCCGG CGGCCGGCTC GCCGCGGCCG TCTCGCGTGC CGGCGGTCTC
GGCATGGTCG GGATGGGCAG CGCGGGCACC GCCGAACAAC TCGACGCCGA ACTGGACGCG
CTGGCCGGGC TGGACCGGCC ATTCGGCATC GGGCTCGTGC ACTGGGTCGT CGAGGCGAGA
CCGGACCTGC TCGAGCGGGC CCTCTGTGCC CGGCCGGCGC TGCTGTCGGT GAGCTTCGGT
GAGGACTGGT CGTGGGTGCG CCGCGCGCAG GAGGTGGGTG CGGCCGCCGT GGCCCAGGTC
GGCACCGCCG CCGCCGCGCG TCGGGCGGTC GACGCCGGTA TCGACGTGCT GGTGGCCCGC
GGCGCGGAGG GCGGTGGCCA CGGCGAGCCG CGGGTCGGCA CGCTGGCGTT GCTGACCGAT
CTGCTCGAGC GGTTCGACGT GCCGGTGCTG GCCGCCGGCG GCATCGCATC CGGGCGCGGT
CTTGCCGCCG TGCTGGCCGC GGGTGCCTCG GCCGCGTGGA TCGGCACCGG GTTCGCCGCG
TGCCCCGAGG CGACGACACA ACCGGCCGCG CGTGCGGCCC TGGTCGCCGC GGAGGGTGAC
CAGACGACGC TGACCCGGGC CTTCGACATC GACAGCGGCT ACCCGTGGCC GGACCACCTG
CCCGAACGCG TGCTGACCGA CGGCGCCGGC CGAGCGACGC CGGTCAACGC GGGCCAGGGG
GTGGGCATGG TGACGAAGGC GGAGCCGGCG GCCGACCTGA TCGCGCGACT GTGCGCGGAG
GCCGAGGGGC TGCTGCGTCG CTGGGTCAGT TCTGCGGACG CCGGTTGA
 
Protein sequence
MPLSTPWCRA MGCEVPIVNA PMGGAAGGRL AAAVSRAGGL GMVGMGSAGT AEQLDAELDA 
LAGLDRPFGI GLVHWVVEAR PDLLERALCA RPALLSVSFG EDWSWVRRAQ EVGAAAVAQV
GTAAAARRAV DAGIDVLVAR GAEGGGHGEP RVGTLALLTD LLERFDVPVL AAGGIASGRG
LAAVLAAGAS AAWIGTGFAA CPEATTQPAA RAALVAAEGD QTTLTRAFDI DSGYPWPDHL
PERVLTDGAG RATPVNAGQG VGMVTKAEPA ADLIARLCAE AEGLLRRWVS SADAG