Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_1191 |
Symbol | |
ID | 4876928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 1265269 |
End bp | 1265847 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640138500 |
Product | RNA polymerase sigma factor SigD |
Protein accession | YP_001069485 |
Protein GI | 126433794 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0709901 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTTT CGGGAGATCG TCTCGATGCT GTCGTCGCTG AGGCAGTGGC GGGCAATCGA GATGCACTCC GGGAAGTGCT GGAGACCATT CGACCGATCG TCGTGCGGTA CTGCCGAGCC AGGATCGGCG CGACGGAACG AAGTGGTCTG TCCGCAGACG ACGTTGCGCA GGAGGTGTGC TTGGCCGCCA TCACGGCGCT GCCGCGCTAC AAGGATCAGG GACGACCGTT CCTCGCCTTC GTGTATGGCA TCGCAGCGCA CAAGATCGCG GACGCCCACC GAGCGGCGAG CCGAAACAAA TCCGACCCCA CCGACGTGGT GCCGGAACGG TTCTCCGGCG AGGCGGGCCC CGAACAGCTG GCCATCAACG CCGAATCGTC GGCCCGGATG GAGAAGCTGC TCGGTGTGCT GCCGGACAAG CAGCGCGAGA TCCTCATCCT GCGCGTCGTC GTCGGCATGA GCGCCGAAGA GACCGCCGAG GCCGTCGGGA GCACCGCCGG AGCGGTCCGC GTGGCCCAGC ACCGCGCGCT GGCGCGACTC AAGGCCGAGA TCATCGCAAC GGGGCACGAC CATGCCTGA
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Protein sequence | MTLSGDRLDA VVAEAVAGNR DALREVLETI RPIVVRYCRA RIGATERSGL SADDVAQEVC LAAITALPRY KDQGRPFLAF VYGIAAHKIA DAHRAASRNK SDPTDVVPER FSGEAGPEQL AINAESSARM EKLLGVLPDK QREILILRVV VGMSAEETAE AVGSTAGAVR VAQHRALARL KAEIIATGHD HA
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