Gene Mjls_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_0220 
Symbol 
ID4875966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp236900 
End bp238354 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content72% 
IMG OID640137534 
ProductOrn/Lys/Arg decarboxylase, major region 
Protein accessionYP_001068524 
Protein GI126432833 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1982] Arginine/lysine/ornithine decarboxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.746138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCTG ACCGGCACAC ACGCGCACCG CTGTTCGAGG CGCTGCGCCG GTTCGTCGAA 
CGCGATCAGG CGCCGTTCTA CAGTCCCGGC CACAAGGGCG GCCGCACGCT GGACCCGTGG
TTCCGCGAAC ACATCGCCGC CGTCGACCTC AACAATCTCG CGGACCTCGA CACGCTGCAC
TGCCCCAGCG GGCCGATCCT CGAAGCCGAA GAACTGATCG CCGATGCGTG GGGCGCCAAG
GCGAGCTTCA TCCTCGTGCA GGGGTCGACC GGCGGCAACA TCACGGTCGC GTTGTCGGCG
CTGCGACCCG GCGATCCGGT GCTGGTGCAG CGCAACGCCC ACAAGTCGGT GCTGGCCGGT
CTGGTCCAGT CCGGTGCGCG GCCGATCTGG CTGACGCCGC AGTGGGATGC GGATTTCGGT
GTCGCGCACG GCCTTCCGGT CGACCGCGTC GAGGCGGCTC TGACCGCCGA GGCCGCGGCC
GCGCTGTGGA TACTGCACCC CACCTACTTC GGGACGACCG CCGACATCGC CGCGCTCACC
GCGGTGTGCC GCCGCCACGG CATCCCGCTG CTCGCCGACG GCGCCCACTC CCCGCACTTC
GCCTTCCACC CCGACCTGCC GGCCGCCGCC GAGACCGCAG GGGCGGCGGC GACCGTGCAG
TCGGTGCACA AGATCCTCTC CGGGCTCAGC CAGGCCGCGG TGCTGCACGT CGACACCGAT
CAGCTGGACG TGCCGACGGT GCGCCGCGCG CTGCAGCTGG TCCAGACCAC CAGCCCGCAC
TTCGCGATCA TGGCGTCGAT CGACCTGGCC CGCCGCCAGA TGGTGGAGGA CGGCCGCCGC
CTCCTCGACG AGACGCTGCG GCGCGCCCGC GACACCGCTG CGCGGCTGGC CCAGATCCCG
GGACTACGCG TGCTGAGCGA CCACGACCTC ACCGGTCCGG GGTCCGGACT CCACCAGCGC
GACGAGACCA AACTGCTGAT CGGGACGCAC GGACTGGCCG CCGACGCATC CGACATCCTG
GCGCGGCTGA CCCGGGAACA CGGCGTGCAG CCCGAACTCG CCGGCGCCGG CCACATCCTG
TGCATCACCA CGATCGGCAA CACCGACGCC GACATGGACC GGCTGGTCGA CGGCCTGACC
GATGTCGCCC TGGCGGTGGG CCGGCGCGAC GGCGGGTGCC CGCCCGATGT GGGCGGTGCG
CTCGACCTGG CCCCGGAGAT CGTGCTGACC CCGCGCGAGG CCTTCTTCGC CGACGTGGAC
ACGGTTTCCC TGCGCGCGGC GGTCGGCCGC ATCGCCGCCG AACCGATCAC GCCCTACCCG
CCGGGCATTC CGCTGGTGAT GCCCGGCGAA CGCCTAAGCG CCGAGGTCGT CGACGTACTC
GACGGCCTGC GCGGTGCGGG CAACCCGATC AGCGCGGCGG ACCCCACCCT CGAGCGGGTG
ACCGTCGTCC GGTGA
 
Protein sequence
MDSDRHTRAP LFEALRRFVE RDQAPFYSPG HKGGRTLDPW FREHIAAVDL NNLADLDTLH 
CPSGPILEAE ELIADAWGAK ASFILVQGST GGNITVALSA LRPGDPVLVQ RNAHKSVLAG
LVQSGARPIW LTPQWDADFG VAHGLPVDRV EAALTAEAAA ALWILHPTYF GTTADIAALT
AVCRRHGIPL LADGAHSPHF AFHPDLPAAA ETAGAAATVQ SVHKILSGLS QAAVLHVDTD
QLDVPTVRRA LQLVQTTSPH FAIMASIDLA RRQMVEDGRR LLDETLRRAR DTAARLAQIP
GLRVLSDHDL TGPGSGLHQR DETKLLIGTH GLAADASDIL ARLTREHGVQ PELAGAGHIL
CITTIGNTDA DMDRLVDGLT DVALAVGRRD GGCPPDVGGA LDLAPEIVLT PREAFFADVD
TVSLRAAVGR IAAEPITPYP PGIPLVMPGE RLSAEVVDVL DGLRGAGNPI SAADPTLERV
TVVR