| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_0168 |
|---|
| Symbol | |
|---|
| ID | 4875914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 180597 |
|---|
| End bp | 181340 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640137482 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001068472 |
|---|
| Protein GI | 126432781 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.248634 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGGGC ACATGACTGA TTCGAAGATC ATCCTCGTCA CCGGCGCCAG CAGCGGGATC
GGCGCCGCCG TCGCCACCCA CCTCGCCCGC GCCGGCCACC ATGTCATCGC CGGCGCGCGC
CGCGAGGACC GCCTGCGCGA ACTCGCCGAC GGCGCCGCCG ATCTCGAGCG CGGCAGCCTG
TCGGTGCGCC GGCTCGACGT CACCGACCGC GCCGAGATGG CGGCCTTCGT CGACGACGCC
GTGTCCACTC ACGGCCGTAT CGATGTCCTC GTCAACAACG CCGGGATCAT GCCCCTGTCG
CGGCTCGACG CCCTGCTGGT CGACCAGTGG GACGCCATGA TCGACGTCAA CGTCCGGGGC
CTGCTCAACG GCATCGCCGC GGCGCTGCCG CACTTCCACC GGCTCGGCGG CGGACACTTC
GTGACCGTGG CCTCGATCGG CGCCCACGAG GTGGTGCCCA CGTCCGCGGT GTACAGCGCC
ACCAAGTACG CCGCGTGGGC GATCACCGAG GGCCTGCGCC AGGAGTCCGA CCCCTCGATC
CGCGTCACGA CCGTCTCCCC CGGCGTGGTG GAGTCCGAGC TCGCGAGCAC CATCACCGAT
CCCGGCGCCG CGGCGGCGAT GCAGGAGTAC CGGGCTGCCG CGATCACACC GGACGCGATC
GCCCGAGCCA TCGCCTACGC GATCTCCGAA CCCGAGGAGG TCGATGTCAA CGAGGTGATC
GTGCGGCCGG CGCGCCAGCG CTGA
|
|---|
| Protein sequence | MLGHMTDSKI ILVTGASSGI GAAVATHLAR AGHHVIAGAR REDRLRELAD GAADLERGSL
SVRRLDVTDR AEMAAFVDDA VSTHGRIDVL VNNAGIMPLS RLDALLVDQW DAMIDVNVRG
LLNGIAAALP HFHRLGGGHF VTVASIGAHE VVPTSAVYSA TKYAAWAITE GLRQESDPSI
RVTTVSPGVV ESELASTITD PGAAAAMQEY RAAAITPDAI ARAIAYAISE PEEVDVNEVI
VRPARQR
|
|---|
| |