Gene Mjls_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_0100 
Symbol 
ID4875846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp107520 
End bp109286 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content67% 
IMG OID640137414 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001068404 
Protein GI126432713 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.119602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGA CGCTGCTGTC GCGCCGCGAC CTGGACTTCC TGCTCTTCGA GTGGCTCCGG 
GTCGACGAGC TGACACAGCG GCCACGATTC GCCGACCATT CGCACGACAC GTTCACCGGC
GTGCTCGACC TGTGTGAACA GCTCGCCGAA CGGTACTTCG CCCCCCACAA CAAGAAGAGC
GACGCCCACG AACCGACCTT CGACGGCGAG AAGGTGACAG TGATCCCCGA GGTCAAAGAG
GCCTGGGAGG CGTTCGCCGC GGCGGACCTG CTGGCGATGG GGATGGACGC CGAACTCGGC
GGCGCGCAGC TGCCCGCGAC GGTCGCCCAG GCCGCGTTCG CGTGGATCTC GGCGGCGAAC
CTCGCCACGT CGGGCTACCT GATGCTCACG ATCGCGAACG CGAATCTGCT GGCCGAGTTC
GGAACGGCCG AGCAGATCGA CAGGTTCGTC AGGCCGATGC TGGCCGGGCG GTTCTCCGGC
ACGATGGCGC TGTCCGAGAC GCAGGCCGGA TCGTCTCTGG CGGATATCAC CACCCGCGCC
GAACCGCGGG ACGACGGCAC CTACCGGCTG TTCGGGTCGA AGATGTGGAT CTCCGGCGCC
GAGCACGAGA TCACCGAGAA CATCGTCAAC CTGGTGCTGG CGAAGATTCC CGGCGGCCCG
CCGGGCACCA AGGGCATCTC GCTGTTCGTC GTGCCGAAAT ACCTTGTCGC CGAGGATGGT
TCGGTGGGTG AGCGCAACGA CGTGGTGCTG GCCGGGCTGA ACCACAAGAT GGGCCAGCGC
GGCATCACCA ACACCGTCCT CAACTTCGGC GAGGGGGTCT TCAACCCGGG CGGCGAGCCC
GGCGCGGTCG GCTATCTGGT CGGCGAACCG CACCGCGGCA TCACCTACAT GTTCCGGATG
ATGAACGAGG CACGCCTGGG TGTCGGCATG GGCGCGGTCG CGCTCGGCTA CACCGGCTAC
CTGAAGTCGG TGAAATACGC CCGCGAACGC CCGCAGGGCA GGCCGGTCAC CGCCAAGGAC
CCGGCCACAC CGCAGGTGCC GATCATCGAA CACGCCGACG TGAAGCGAAT GTTGTTGGCG
CAGAAGTCCT ATGTCGAGGG CGCGCTGGCA CTCGCGCTGT ACTGTGCGCG GCTGGTCGAC
CTCGGCGACA ACCAGGATCT GCTCGACATC CTCACGCCCG TCGCCAAGAG TTGGCCGTCG
CAGTGGTGTC TGGAGGCCAA CAGCCTGGCG ATCCAGGTCC ACGGCGGCTA CGGCTACACC
CGCGAATACG ACGTCGAACA GCACTACCGC GACAACCGCC TCAACCCGAT CCACGAGGGG
ACCCACGGCA TCCAGAGCGT GGATCTGCTC GGCCGCAAGG TCACCCAGCG CGGTGGCGCA
AGCCTGCGCG CGGTGGGCGG GGCGCTGGCG GCGACGGTGG CCGCCGCGGG TGAATGCGGT
GGTGAGGCAG CGTCATTGGC GGAGGAACTC GACGCGCGGT GGCAGCGGCT GGTCGCCGTC
ACCACCGCGA TGTTCGGCTC CGGCGACATC GAGGCGGCGA TGGCCAACAG CGTCGTCTAC
CTCGAGGCGT TCGGGCACGT GGTGATCGCC TGGATGTGGC TCGAGCAGTT CCTCGCCGCC
GAGGGCCGGA CCGGTGACTT CTACGACGGC AAACGGCAGG CGGCGCGGTT CTTCTACCGG
TACGAGCTGC CGAAGGTCGG ACCCCAGCTC GACCTGCTCG ACAGCCTGGA CCGGACCACG
CTGGAGATGC GTCCCACCTG GTTCTGA
 
Protein sequence
MKSTLLSRRD LDFLLFEWLR VDELTQRPRF ADHSHDTFTG VLDLCEQLAE RYFAPHNKKS 
DAHEPTFDGE KVTVIPEVKE AWEAFAAADL LAMGMDAELG GAQLPATVAQ AAFAWISAAN
LATSGYLMLT IANANLLAEF GTAEQIDRFV RPMLAGRFSG TMALSETQAG SSLADITTRA
EPRDDGTYRL FGSKMWISGA EHEITENIVN LVLAKIPGGP PGTKGISLFV VPKYLVAEDG
SVGERNDVVL AGLNHKMGQR GITNTVLNFG EGVFNPGGEP GAVGYLVGEP HRGITYMFRM
MNEARLGVGM GAVALGYTGY LKSVKYARER PQGRPVTAKD PATPQVPIIE HADVKRMLLA
QKSYVEGALA LALYCARLVD LGDNQDLLDI LTPVAKSWPS QWCLEANSLA IQVHGGYGYT
REYDVEQHYR DNRLNPIHEG THGIQSVDLL GRKVTQRGGA SLRAVGGALA ATVAAAGECG
GEAASLAEEL DARWQRLVAV TTAMFGSGDI EAAMANSVVY LEAFGHVVIA WMWLEQFLAA
EGRTGDFYDG KRQAARFFYR YELPKVGPQL DLLDSLDRTT LEMRPTWF