Gene BURPS1106A_3948 details

Gene Information

• Locus tag: BURPS1106A_3948
• Symbol: tag
• ID: 4902353
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: +
• Start bp: 3854344
• End bp: 3854952
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640137174
• Product: DNA-3-methyladenine glycosidase I
• Protein accession: YP_001068168
• Protein GI: 126453188
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2818] 3-methyladenine DNA glycosylase
• TIGRFAM ID: [TIGR00624] DNA-3-methyladenine glycosylase I

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.857416
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGAAGC AGGGACGCTG CAGTTGGGTG AAAACCGAAG CGGACGCTCA CTATCACGAT 
ACCGAGTGGG GTGTGCCGTC GCGCGACGAC CGGCATCTAT TCGAAATGCT CGTACTCGAA 
GGCGCGCAGG CCGGCCTGTC GTGGTCGACG ATCTTGAACA AGCGCGCCGG CTACCGCGCG 
GCGTTCGCCG GCTTCGATAT CGACGAGGTC GCCCGGTTCA CGCCGAAGCG GATCGACGAG 
CTGATGCTCG ATGCGAGCAT CGTGCGCAAT CGCGCGAAGA TCGAAGCCGC CGTTGCGAAC 
GCGCGCGCGG TCCAGCAGAT TCGCGCGGAA CACGGCTCGC TCGCCGCGTT CCTGTGGTCG 
TTCGTCGATC ATTCGCCGCT GCAGAACGCG TGGGCGTCGT ATCGCGACGC GCCTGCGTCG 
ACCGAGCGTT CGGACGCGCT CAGCCAGGCG CTCAAGCGCT ACGGCTGCAA GTTCGTCGGC 
TCGACGATCT GCTATGCGTT GATGCAGGCG ACGGGGATGG TCAACGACCA CGAAAGTACC 
TGCCCGTGCC ATGCGCGCTG TGCGGCGCTG GGCGAAAAGG CCCGCCGAAG GAAGAAGCCG 
GCGGCCTGA 

 

Protein sequence

MPKQGRCSWV KTEADAHYHD TEWGVPSRDD RHLFEMLVLE GAQAGLSWST ILNKRAGYRA 
AFAGFDIDEV ARFTPKRIDE LMLDASIVRN RAKIEAAVAN ARAVQQIRAE HGSLAAFLWS 
FVDHSPLQNA WASYRDAPAS TERSDALSQA LKRYGCKFVG STICYALMQA TGMVNDHEST 
CPCHARCAAL GEKARRRKKP AA