| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3932 |
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| Symbol | cheD |
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| ID | 4900004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 3839035 |
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| End bp | 3839739 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640137158 |
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| Product | chemoreceptor glutamine deamidase CheD |
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| Protein accession | YP_001068152 |
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| Protein GI | 126454009 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.329787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGGC TGCCGATCGC GACCAACCTC TATTTCGATG CGCACTTTCA CCGCCACGGC
GTGAAGCTGC TGCCGAACGA GTTCTACACG ACGCGCGAGG ACATGGTGCT CGTCACGGTG
CTCGGCTCGT GCGTGGCCGC GTGCCTGCAC GATCCGATCG GGCGGATCGG CGGGATGAAC
CACTTCATGC TGCCCGACGA CGGCGCGGAC CCGTCCGCCG CCGCGTCCGA ATCGATGCGC
TACGGCGCGT ATGCGATGGA AGTGCTGATC AACGAGCTCA TCAAGGCGGG CGGCCGGCGC
GAGCGCTTCG AGGCGAAGGT GTTCGGCGGC GCGGCCGTGC TCGCCGGGAT GACGACGATC
AACATCGGCG ATCGCAACGC CGATTTCGTG CGCCGCTATC TGGCGCTCGA GCGCATCCGC
ATTACCGCCG AGGATCTGCA GGGCGTGCAT CCGCGCAAGG TCGCGTTCAT GCCGCACACG
GGGCAGGCGA TGGTCAAGAA GCTGCGCGTG CAGGCGCCCG ACGTCGCCGC GCGGGAAGCC
GCGCTCGCGC GCGAGGCGGT CGACCCGCAC GGCGAGCGCG CGCCCCGCGT GCGGCCGCGT
GTCGAGCTGT TCGGCACGCC CGCGCCGAAG GCGCAGGCGA AGCCTCGCAT CGAATTGTTC
GGTATGCGGG CCACGCAGCC CGCCACAAGA AAGCAGGAGG CTTGA
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| Protein sequence | MSGLPIATNL YFDAHFHRHG VKLLPNEFYT TREDMVLVTV LGSCVAACLH DPIGRIGGMN
HFMLPDDGAD PSAAASESMR YGAYAMEVLI NELIKAGGRR ERFEAKVFGG AAVLAGMTTI
NIGDRNADFV RRYLALERIR ITAEDLQGVH PRKVAFMPHT GQAMVKKLRV QAPDVAAREA
ALAREAVDPH GERAPRVRPR VELFGTPAPK AQAKPRIELF GMRATQPATR KQEA
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