| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3804 |
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| Symbol | rplC |
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| ID | 4900127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 3704474 |
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| End bp | 3705145 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640137030 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001068034 |
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| Protein GI | 126453776 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000896818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGAAAA CGATGAGCCT TGGACTCGTA GGTCGCAAGG TTGGCATGAC CCGTATCTTC
ACGGCGGAAG GGGATTCGAT TCCCGTCACC GTGCTCGACG TGTCGGACAA CCGCGTGACG
CAGATCAAGA CTGTTGAAAC CGACGGCTAC ACGGCCGTGC AGGTTGCATT CGGCTCCCGC
CGCGCGTCGC GCGTGACGAA GCCGCTGGCA GGTCATCTCG CCAAAGCCGG TGTCGAAGCC
GGTGAAATCC TCAAGGAATT CCGCATCGAA GCCGACAAGG CCGCCGAGCT GTCGAACGGC
GCCGTGATCG GTCCGGATCT GTTCGAAGTG GGCCAGAAGG TCGACGTGCA AGGCGTGTCG
ATCGGTAAGG GCTACGCGGG CACGATCAAG CGCTACAACT TCGGCTCCGG CCGCGCATCG
CACGGTAACT CGCGCTCGCA CAACGTGCCG GGCTCGATCG GTATGGCGCA GGATCCGGGT
CGCGTGTTTC CGGGCAAGCG CATGACGGGT CACATGGGTG ACGAGACGGT GACGGTTCAG
AACCTGGAAA TCGCTCGCAT CGACGCCGAT CGCAAGCTGC TGCTCGTCAA GGGTGCAGTT
CCGGGTGCGA AGGGCGGCAA GGTTTTCGTG ACGCCGGCCG TGAAGACGCG TGCCGTGAAG
GGGGCGAAAT AA
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| Protein sequence | MEKTMSLGLV GRKVGMTRIF TAEGDSIPVT VLDVSDNRVT QIKTVETDGY TAVQVAFGSR
RASRVTKPLA GHLAKAGVEA GEILKEFRIE ADKAAELSNG AVIGPDLFEV GQKVDVQGVS
IGKGYAGTIK RYNFGSGRAS HGNSRSHNVP GSIGMAQDPG RVFPGKRMTG HMGDETVTVQ
NLEIARIDAD RKLLLVKGAV PGAKGGKVFV TPAVKTRAVK GAK
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