| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3656 |
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| Symbol | |
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| ID | 4900475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 3558723 |
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| End bp | 3560561 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640136882 |
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| Product | hypothetical protein |
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| Protein accession | YP_001067887 |
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| Protein GI | 126453567 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGAGT TGTTGCCGTA TTACGAACGC GAACTGTCGT TTCTGCGGCG CTATTCGCTC
GAATTCGCGA ACCGTTACCC GAAGATCGCC GCGCGTCTCG CCCAGACGGG CGAGCAGTGC
GAGGATCCGC ACGTCGAGCG GATGATCGAA TCGTTCGCGC TGCTCGGCGC GCGGATCAAC
AAGAAGCTCG ACGACGAATA TCCCGAGTTC ACCGAAGCGC TCGTCGAAGT CCTCTACCCG
CACTATCTGC GGCCGTTCCC GTCATGCTCG ATCGCGCAGT TCGGTGCGCC GCATGCGTTC
GCGGAGCTCA CCGAGCCGCG GATCGTCGAG CGCGGCACCG AGCTGAAGAG CCGCGCGATT
CGCGGCGTGC AGTGCCGGTT CCGCACCGCG TACGACGTGA CGCTCGCGCC GATCCGGCTC
GCCGATGCGC GCTACGGATC GGTCGCGGTG GCGCCCGCCG CAGCAAGGCT GCCCGGCAAC
GCGACGGGCG TGATCTCGAT CGCGTTCGAA TCGACGTCGC CGCAGCTCGA TCTTGCCGCG
CTGAAGCTCG GCAAGCTGCG CGCGCATTTG CACGGCGAGC AATCGTTCGT CGCCGCGCTG
GCCGATTGCC TGTTCGCGCA CGCGCTCGCC TGCTACGTCG AGCCCGATCG CGGCGGCCGC
TGGATCGCGC TCGGCAAGAC GCCGTTCGAG CACGCGGGCT TCGACGAGAC CGACGCGCTG
ATCGACTATC CGGCCCGTTC GCACCCGGCC TATCGGCTGC TGACCGAATA CTTCGCATTC
CCGGATAAAT TCAACTTCGT CGATTTCGAT CTGGGCGCAC TCGCGCGGCG CGCGGGGCCC
TGCCGGCAGC TGACGCTGCA CATCGCGCTG CGCGACGTGC GCGGCGATTC GCATGTCGCG
CGGCTGCTCG ATCTGCTGAG CGCGAGCCAT TTCCGGCTCT TCTGCACGCC GGTCGTGAAC
CTGTTCCGCC AGCACGGCGA GCCGATTCGG GTCGACCACC GGGCGGTGTC GTACCCGGTG
ATCGGCGATG CGCGCCGCGC GTTCGCGTAC GAGGTATATT CGATCGATTC GGTGCATCTC
GTGCGGCAGC GCGCGGACCG CGAAACGCTC GTCGAATTCC GGCCGTTCTA TTCGCTGCAT
CACGGCGAAG CCGCGCAGGC CGGCCACTAC TGGTTCGCGC GGCGCAACGA CGACGTCGCG
CGCAAGAGCC CCGGCTACGA GACCGAGATT TCGGTCGTCG ACGTCGACTT CGAGCCGGGC
GCGCCGCAAA CCGATACGTT GAGCCTCGAT CTCACCTGTA CGAACCGCGA CCTGCCCGCC
GCGCTCGCAA CGGGGCTCGA CGGCGGCGAT CTCTTCATCG ACGGCGGCGA GCAGCCCGGC
CCGATCGCGC TATTGCGCCG GCCGACGCCG AGCGCGCGCT TCGAGCGCGG CCACGCCGCG
CACTGGCGCC TCGTGTCGCA TCTCGCGCTC AATCACGTGT CGCTTGCCGA AGAAGGGCTC
GCCGCGCTGA AGGAAGCGCT CGTGCTGTAC GATCTGAGGC GCTCCGCGGT GTCGACGCGC
CATATCGACG GGATCGTCGG CATCGAGCAG AAGAGCGCGG TGCAATGGCT GCCGGGCAAG
CCGTTCGCGA CGTTCGTGCG CGGCGTCGAG ATCCGGCTCG CGATCGACGA CGAACATTTC
GTCGGCTCGA GCCTCGCGAC GTTCGTGCGG ATGATCGACG CGTTCTTCGG GCTGTACGTG
CACCTCAACA GCTTTGTTCA ACTGATCGTC GTGTCCAGGC GCACCGGCGA GGAGATCATG
CGATGCAAAC CGCGCAGCGG CGAATCGATC CTGGCGTAG
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| Protein sequence | MEELLPYYER ELSFLRRYSL EFANRYPKIA ARLAQTGEQC EDPHVERMIE SFALLGARIN
KKLDDEYPEF TEALVEVLYP HYLRPFPSCS IAQFGAPHAF AELTEPRIVE RGTELKSRAI
RGVQCRFRTA YDVTLAPIRL ADARYGSVAV APAAARLPGN ATGVISIAFE STSPQLDLAA
LKLGKLRAHL HGEQSFVAAL ADCLFAHALA CYVEPDRGGR WIALGKTPFE HAGFDETDAL
IDYPARSHPA YRLLTEYFAF PDKFNFVDFD LGALARRAGP CRQLTLHIAL RDVRGDSHVA
RLLDLLSASH FRLFCTPVVN LFRQHGEPIR VDHRAVSYPV IGDARRAFAY EVYSIDSVHL
VRQRADRETL VEFRPFYSLH HGEAAQAGHY WFARRNDDVA RKSPGYETEI SVVDVDFEPG
APQTDTLSLD LTCTNRDLPA ALATGLDGGD LFIDGGEQPG PIALLRRPTP SARFERGHAA
HWRLVSHLAL NHVSLAEEGL AALKEALVLY DLRRSAVSTR HIDGIVGIEQ KSAVQWLPGK
PFATFVRGVE IRLAIDDEHF VGSSLATFVR MIDAFFGLYV HLNSFVQLIV VSRRTGEEIM
RCKPRSGESI LA
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