Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3652 |
Symbol | |
ID | 4900407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 3552614 |
End bp | 3553546 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640136878 |
Product | ompA family protein |
Protein accession | YP_001067883 |
Protein GI | 126453039 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0672699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAAGC CCCGCCTGCC CCTGCTGCGC GCCCGCCGCT TCGCGCTCGC GCTCGCCGCG CTCGCGCTCG GCGGCGCCGC GCGCGCCGAC AACGTCGGCC CCGCCACCGT CACGCCGATC GACGCAGGCG GCGTGCCCGT GAAATCGGTG CCGCTCGCCG CGCCCGTGAC GGCCGCGCCG GTCGCCGCGA CGGCCGGCGC GGGCGCGACC GTGTCGTCGC CGCCGCCCGC GAACGCGACG CCGGGCCAGG TCGTCGCCGG CGGCAAGGTT GCCGACGAAG CGACGAAGGC CGCCGTGCTG CAGCGCCTGC GCGACACGTA CGGCGCCGCG AACGTCGTCG ACCAGATCGA AATCGGCAAC GTCGCGACGC CGCCGAACTG GTCCGCGAAC GTCCAGAAGC TGATCGGCCC GCAACTGAAA CAGATCAGCA AAGGACAGCT GAAGATCGAC GGCACGCAGA TCGACGTGAA GGGCGAAGTG CACAACGAGG CGCAGCGCCA GCAGCTCGCG AGCGACATGG CGAACGCGCT GAATCCGACC TACACGATCA AGAACGGGCT GCGCGTGAGC GCGTCCGAGC AGGGCCTGCT CGACCAGACG CTCGCGAACC GCACGATCGA ATTCGAAACC GGCAGCGCGA CGCTCACGCC GCAAGGCCGC GCGATTCTCG ACCAGATGGC GGGCGCGCTC GCGAAGATGT CGAACCGAAC GGTCGAGATC ATCGGGCACA CCGACAACTC GGGCAACCGC ACGTCGAACA TCGCGCTCAG CCAGGCGCGC GCGGATGCGG TCAAGGGATA TCTGGTGACG AAGGGCATCG CGTCGCAGCA ACTGACGACG ACGGGCGTCG GCCCCGATCA GCCGATCGCG CCGAACGATT CGGCCGACGG TCGCGCACGC AATCGCCGGA TCGAATTCCG CGCGGGACAG TAA
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Protein sequence | MTKPRLPLLR ARRFALALAA LALGGAARAD NVGPATVTPI DAGGVPVKSV PLAAPVTAAP VAATAGAGAT VSSPPPANAT PGQVVAGGKV ADEATKAAVL QRLRDTYGAA NVVDQIEIGN VATPPNWSAN VQKLIGPQLK QISKGQLKID GTQIDVKGEV HNEAQRQQLA SDMANALNPT YTIKNGLRVS ASEQGLLDQT LANRTIEFET GSATLTPQGR AILDQMAGAL AKMSNRTVEI IGHTDNSGNR TSNIALSQAR ADAVKGYLVT KGIASQQLTT TGVGPDQPIA PNDSADGRAR NRRIEFRAGQ
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