Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3644 |
Symbol | |
ID | 4902931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 3543888 |
End bp | 3545303 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640136870 |
Product | TolC family type I secretion outer membrane protein |
Protein accession | YP_001067875 |
Protein GI | 126452663 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGGCG CGCTCGCGCT CTTCGCATCG CAAGCGGCGT ACGCGCAATG GCTCGATCTC TACGGAACCC GAAAGAATGT GTCGGCTTCT CCCGCCGCGC CGATGCTGAA GAACGCGACA TGCCAGCCCG AGCTCGCGGA CCGTCCGATC GAGCTCGAAG ACGCGATCCT GCAGGCGATC TGCGCGAACC CGCAGGCACG GCGCGCGTGG GCCGATGCGC GCGCGCAGGC CGCCCAGCTC GGCGTGAAGG AGGCGGCGTA TCTGCCGACG CTCAATGCAA CAGCGGGCAT TCAGCGCAAC TGGCAAACGA CGACGTATGA GCAGGACCTC GGCCCGATCA CGCTCACCGC CGACCAGAAG CAGATCCAGA CGAGCCGCTA CGGCGCGTTG AACCTGAGCT GGGTGCTGTT CGATTTCGGC AAGCGCAGCG CGGCGCTCAG GCAGGCGCGC GAGCTCCTCG CCGCCGCCAA CGCGACGCAG GACGACACGC TCCAGACCAT CCTGTTCAAT GCCGCCCAGG CGTATTACAA CCTGCGCGAC ACGCAGGCGG CGCTCGACGC GGTGCGCACG ACCGAACGCG TCGCGCAGGA TAGCCTCACC GCGGCGAAGG CGAAGCACGA CGCCGGCGCC GGCACGCTGA GCGATCAACT GCAGGCGCAA ACGAGCTATC GCCGCGCGGT GCTCGATCGC GTGAGCGCCG AAGGCGACGT GCGGAACGCG ACGGGCGTGC TCGCCGTCGC GATGGGGCTC GACGCGAACA CGCCGCTGCG GATCGCGACC GCCGAGCCGC CGGTCGATCG CAACGCGTTC GCCGAAGGCA TCGCGCAATT GATCGACGAG GCGAAGCGGC AGCATCCGAA GCTCGTCGCC GCGCGCGCGA AACTCGACGC GGCGCGCGCG AACGTCGATG CGGTGCGTGC GCAGGGCCGC CCGACCATCT CGCTGACCGG CAGCCTCAGC CGCAACAGCC CGTCGTATCA GCAGCAGCCG GGCATCCAGA CCACCGCGAG CCACGGCAGC ATGATCGGCG TGCAGGTGAC GATCCCGCTC TTCGAAGGCT TCGCGTCCGG CTACCGCGTC GCGGCCGCGC AGGCACAGGC GGATGCGCAG GAGGCCGACG TGCAGAACAC CGAGCTGAAC GTCTCGCTCG ACGTGTGGAA GAGCTATCAG AGCCTGCAGA CCGACACCGC GAATCTCGAC AATTCGAAGG ACCTGCTCGG CGATGCGCAA CGCTCGCTCG ACATCGCACG GGGCCGGTAC AAGGCGGGCG TCGGCACGTT CACGGAGTTG CTCAATGCGC AGACCGCGCT CGCGGACGCG CAGAAGCAAC GCGTGCAGGC GCTGTCGAAA TGGCGCACCG CGCGGCTCAA GCTCGCGGCG AGCCTCGGCA GCATCGGCCT GTGGTCCGCC CATTGA
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Protein sequence | MAGALALFAS QAAYAQWLDL YGTRKNVSAS PAAPMLKNAT CQPELADRPI ELEDAILQAI CANPQARRAW ADARAQAAQL GVKEAAYLPT LNATAGIQRN WQTTTYEQDL GPITLTADQK QIQTSRYGAL NLSWVLFDFG KRSAALRQAR ELLAAANATQ DDTLQTILFN AAQAYYNLRD TQAALDAVRT TERVAQDSLT AAKAKHDAGA GTLSDQLQAQ TSYRRAVLDR VSAEGDVRNA TGVLAVAMGL DANTPLRIAT AEPPVDRNAF AEGIAQLIDE AKRQHPKLVA ARAKLDAARA NVDAVRAQGR PTISLTGSLS RNSPSYQQQP GIQTTASHGS MIGVQVTIPL FEGFASGYRV AAAQAQADAQ EADVQNTELN VSLDVWKSYQ SLQTDTANLD NSKDLLGDAQ RSLDIARGRY KAGVGTFTEL LNAQTALADA QKQRVQALSK WRTARLKLAA SLGSIGLWSA H
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