Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3574 |
Symbol | pcaF |
ID | 4902564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 3482706 |
End bp | 3483923 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640136800 |
Product | beta-ketoadipyl CoA thiolase |
Protein accession | YP_001067805 |
Protein GI | 126453966 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02430] beta-ketoadipyl CoA thiolase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.887338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGGAAT TCGACATGAC CGAAGCATTC CTGTGTGACG CAATCCGCAC GCCCATCGGC CGCTACGGCG GCGCGCTGGC GCCGGTGCGG GCCGACGACC TCGGCGCGGT GCCGCTCAAG GCGCTCGTCG AGCGCAACCG CGACGTCGAC TGGGCCGCCG TCGACGACGT GATCTACGGC TGCGCGAATC AGGCCGGCGA GGACAACCGC AACGTCGCGC GCATGTCGCT GCTGCTCGCC GGCTTGCCGC ACGCCGTGCC CGGCGCGACG ATCAACCGCC TCTGCGGCTC CGGGATGGAC GCGATCGGCC TCGCCGCGCG CGCGATCAAG GCGGGCGAGG CGAGCCTGAT GATCGCCGGC GGCGTCGAGA GCATGAGCCG CGCGCCGTTC GTGACCGGCA AGGCGACGAG CGCGTTCTCG CGCCAGGCTG AGATCTTCGA TACGACCATC GGCTGGCGCT TCGTCAATCC GCTGATGAAA CAGCGGTACG GCGTCGATTC GATGCCGGAG ACGGCCGAAA ATGTCGCGAC CGATTACCGC GTGAGCCGCG CCGATCAGGA CGCGTTCGCG CTGCGCAGCC AGCAGAAGGC GGCGCGCGCG CAGGCCGACG GCACGCTCGC GCAGGAGATC GCGCCGGTGA CGATCGCGCA GAAGCAGGGC GAGCCGCTCG TCGTGGCGCG CGACGAGCAT CCGCGCGAGA CGACCCTCGA GGCGCTCGCG AAGCTCAAGG GCGTGGTGCG CCCGGACGGC ACGGTGACGG CGGGCAACGC GTCGGGCGTG AACGACGGTG CGTGCGCGCT GCTGGTGGCG AGCGAGGCGG CGGCGCGCCG CCACGGGCTC GTGCCGCGCG CGCGCGTGCT GGGGATCGCG ACGGCGGGCG TGGAGCCGCG GGTGATGGGG ATCGGCCCGG CGCCGGCGAC GCAGAAACTG CTCGCGCGGC TCGGGATGAC GCTCGACCAG TTCGACGTGA TCGAGCTGAA CGAGGCGTTC GCGTCGCAGG GGCTCGCGGT GCTGCGGCTG CTGGGCGTCG CGGACGACGA TGCGCGGGTG AATCCGAACG GCGGCGCGAT CGCGCTCGGG CATCCGCTTG GCGCGTCGGG CGCGCGGCTC GTGACGACCG CCACGTATCA ACTGCACCGC ACGGGCGGCC GCTTCGCGCT CTGCACGATG TGCATCGGCG TCGGCCAGGG CATCGCGATC GCGATCGAGC GCGTGTGA
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Protein sequence | MPEFDMTEAF LCDAIRTPIG RYGGALAPVR ADDLGAVPLK ALVERNRDVD WAAVDDVIYG CANQAGEDNR NVARMSLLLA GLPHAVPGAT INRLCGSGMD AIGLAARAIK AGEASLMIAG GVESMSRAPF VTGKATSAFS RQAEIFDTTI GWRFVNPLMK QRYGVDSMPE TAENVATDYR VSRADQDAFA LRSQQKAARA QADGTLAQEI APVTIAQKQG EPLVVARDEH PRETTLEALA KLKGVVRPDG TVTAGNASGV NDGACALLVA SEAAARRHGL VPRARVLGIA TAGVEPRVMG IGPAPATQKL LARLGMTLDQ FDVIELNEAF ASQGLAVLRL LGVADDDARV NPNGGAIALG HPLGASGARL VTTATYQLHR TGGRFALCTM CIGVGQGIAI AIERV
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