Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3540 |
Symbol | secA |
ID | 4900958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 3441882 |
End bp | 3444677 |
Gene Length | 2796 bp |
Protein Length | 931 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640136766 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_001067776 |
Protein GI | 126452459 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACCG GTTTTCTTCA GAAAATTTTT GGCAGCCGCA ATCAGCGGCT CGTCAAGCAA TACCAAAAGA CCGTCGCGGC GATCAATGCG CTTGAAACGC AGATCGAGAC GCTGACGGAC GACCAGTTGC GCGGCAAGAC AGGGGAGTTC CGTCAGCGCA TCGCGGCCGG CGAGTCGCTC GACAAGCTCC TGCCCGAGGC GTTCGCCGTG TGCCGCGAGG CGAGCCGCCG CGTGCTGAAG ATGCGCCACT TCGACGTGCA GATGATCGGC GGGATGGTGC TGCATTACGG CAAGATCGCC GAAATGCGCA CGGGCGAGGG CAAGACGCTC GTCGCGACGC TCGCCGCGTA CCTGAACGCG CTCGCCGGCC GCGGCGTGCA CGTCGTGACG GTCAACGATT ACCTCGCGCA GCGCGACGCC GAGTGGATGG GCCGGCTCTA CAACTTCCTC GGGCTTTCGG TCGGCATCAA CCTCTCGGGG ATGGAGCACG ACCAGAAGCA GGCGGCGTAC GCAGCCGACA TCACGTACGG CACGAACAAC GAATTCGGTT TCGACTACCT GCGCGACAAC ATGGTCTACG AGACCGATTC GCGCGTGCAG CGGCCGCTGA ATTTCGCGGT GGTCGACGAA GTCGACTCGA TCCTGATCGA CGAAGCGCGC ACGCCGCTCA TCATCTCGGG CCAGGCTGAG GATCACACCG AGCTGTACGT GCGGATGAAC GCGCTGCCGC CGCTGCTCGA GCGCCAGATC GGCGAGGAGA AGGCGGACGG CACGGGCGTC GAGAAGCCGG GCGACTACAC GCTCGACGAG AAGGGCCGCC AGGTGTTCCT GACCGAGTCG GGCCATGAGA AGGCCGAGCG GATGCTCGCC GAATGGGGCT TGATCGGCGA CGGCGAGAGC CTCTACGCGC CGCAGAACAT CACGCTGATG CACCATGTGT ACGCGGCGCT GCGCGCGCAC ACGCTGTTCC ATCGCGATCA GCACTACGTC GTGCAGAACG ACGAGGTGAT CATCGTCGAC GAATTCACGG GCCGCCTGAT GCCGGGCCGC CGCTGGTCCG ACGGCCTGCA CCAGGCGGTC GAGGCGAAGG AGCACGTGAA GATCCAGAGC GAGAACCAGA CGCTCGCGTC GATCACGTTC CAGAACTACT TCCGGATGTA CGCGAAGCTC TCGGGCATGA CGGGCACGGC GGACACCGAG GCGTACGAAT TCAACGAGAT CTACGGCCTC GAGACGGTCG TGATCCCGAC CAACCGGCCG CCGAAGCGGA TCGACAAGCA GGATCAGATC TACAAGACCG CGAAGGAGCG CTACGACGCG GTGATCCGCG ACATCCGCGA GTGCCACGAG CGCGGCCAGC CCGTGCTCGT CGGCACGACG TCGATCGAGA ACTCGGAGCT GCTGTCGCAC CTGCTCAAGC AGGCGGGCCT GCCTCACGAG GTGCTGAACG CGAAGCAGCA CGCGCGCGAA GCGGCGATCG TCGCCGAGGC GGGCCGGCCG AAGCGCATCA CGATCGCGAC GAACATGGCG GGCCGCGGCA CCGATATCGT GCTCGGCGGC AACGTCGAGA AGCAGGCGGC GTTCATCGAG GCCGACGAAT CGATTCCGGC CGACGAGAAG GCGCGCCGCA TCCAGCAACT GCACGACGAG TGGGAAACGC TGCACGAGCA GGTGAAGACC GCGGGCGGCC TGCACATCAT CGGCACCGAG CGCCACGAGT CGCGCCGGAT CGACAATCAG TTGCGCGGCC GCGCGGGCCG TCAGGGCGAT CCGGGCTCGT CGCGCTTCTA CCTGTCGCTC GAGGATCCGC TGTTGCGCAT CTTCGCGGGC GACCGCGTGC GCGCGATCAT GGACCGCCTG AAGATGCCGG AGGGCGAGGC GATCGAAGCG GGCATCGTCA CGCGTTCGAT CGAGTCCGCG CAACGCAAGG TCGAAGCGCG CAACTTCGAT ATCCGCAAGC AGCTGCTCGA ATACGACGAC GTGTCGAACG ATCAGCGCAA GGTGATCTAC CAGCAGCGCA ACGAGCTGCT CGAAGCGCAC GACATCGCCG AAACGATCGG CGCGATGCGT CACGGCGTGA TCTCGGAAGT GGTTCGCCAG TTCGTGCCGG CGGGCAGCAT CGAGGAGCAG TGGGATCTGC CCGAGCTCGA AGAGACGCTG CGCAACGATT GGCAGCTGGA CCTCGCGATC CAGGAAATGG TGAACGAGTC GTCGTCGATC AACGCGGACG AGATCCTCGA CGCCGTCACG ACGGCCGCCG ACGAACACTA CGAAGCGAAG GTCGCGCTGG TCGGCCGCGA ATCGTTCAGC GCGTTCGAGC GCTCGATCAT GCTGCAGACG CTCGACCGGC TGTGGCGCGA GCACCTCGCG GCGCTCGATC ATCTGCGTCA GGGCATTCAC CTGCGCGGCT ATGCGCAGAA GAACCCGAAG CAGGAATACA AGCGCGAGGC GTTCGAACTG TTCGCGGCGA TGCTCGATGC GGTGAAGCAG GAAGTCACGC GGATCGTGAT GAACGTGCAG ATCCAGTCGC CCGAGCAGCT CGAGGAGGCA GCCGAGCAGA TCGAGGAGCA GGGCGGCCAG CTCGGCAACG TCGAGTTCCA GCACGCCGAT TTCGCGGCGG CGGCGGCCGC GGCGACGGCG GGCGGCGCGG TGGTCGCGGA TGCGACGGCC GAGATGGTTA GCCACGCGAT GAGCCACAGC GGCCCGGCGG GCGAAGTGCC GCGAGTCGGC CGCAACGATC CGTGCCCGTG CGGCAGCGGC AAGAAGTACA AGCACTGTCA CGGCAAGCTG AACTGA
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Protein sequence | MTTGFLQKIF GSRNQRLVKQ YQKTVAAINA LETQIETLTD DQLRGKTGEF RQRIAAGESL DKLLPEAFAV CREASRRVLK MRHFDVQMIG GMVLHYGKIA EMRTGEGKTL VATLAAYLNA LAGRGVHVVT VNDYLAQRDA EWMGRLYNFL GLSVGINLSG MEHDQKQAAY AADITYGTNN EFGFDYLRDN MVYETDSRVQ RPLNFAVVDE VDSILIDEAR TPLIISGQAE DHTELYVRMN ALPPLLERQI GEEKADGTGV EKPGDYTLDE KGRQVFLTES GHEKAERMLA EWGLIGDGES LYAPQNITLM HHVYAALRAH TLFHRDQHYV VQNDEVIIVD EFTGRLMPGR RWSDGLHQAV EAKEHVKIQS ENQTLASITF QNYFRMYAKL SGMTGTADTE AYEFNEIYGL ETVVIPTNRP PKRIDKQDQI YKTAKERYDA VIRDIRECHE RGQPVLVGTT SIENSELLSH LLKQAGLPHE VLNAKQHARE AAIVAEAGRP KRITIATNMA GRGTDIVLGG NVEKQAAFIE ADESIPADEK ARRIQQLHDE WETLHEQVKT AGGLHIIGTE RHESRRIDNQ LRGRAGRQGD PGSSRFYLSL EDPLLRIFAG DRVRAIMDRL KMPEGEAIEA GIVTRSIESA QRKVEARNFD IRKQLLEYDD VSNDQRKVIY QQRNELLEAH DIAETIGAMR HGVISEVVRQ FVPAGSIEEQ WDLPELEETL RNDWQLDLAI QEMVNESSSI NADEILDAVT TAADEHYEAK VALVGRESFS AFERSIMLQT LDRLWREHLA ALDHLRQGIH LRGYAQKNPK QEYKREAFEL FAAMLDAVKQ EVTRIVMNVQ IQSPEQLEEA AEQIEEQGGQ LGNVEFQHAD FAAAAAAATA GGAVVADATA EMVSHAMSHS GPAGEVPRVG RNDPCPCGSG KKYKHCHGKL N
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